Details

Autor(en) / Beteiligte

• Sun, Cheng-He
• Gu, Yang-Liang
• Liu, Da-Wei
• Du, Hong-Wei
• Lu, Chang-Hu

Titel

Sequencing and Analysis of the Complete Mitochondrial Genome of Lentipes ikeae

Ist Teil von

• Animals (Basel), 2024-03, Vol.14 (6), p.943

Ort / Verlag

Switzerland: MDPI

Erscheinungsjahr

2024

Link zum Volltext

Quelle

Free E-Journal (出版社公開部分のみ）

Beschreibungen/Notizen

• We sequenced and analyzed the complete mitochondrial genome of and explored the phylogenetic relationships among Sicydiinae based on mitochondrial genome sequences. The complete mitochondrial genome sequence of was determined using the Illumina HiSeq X Ten sequencing platform, and the gene structural characteristics and base composition were analyzed. Based on the mitochondrial genome sequences of 28 Sicydiinae species published in GenBank and mitochondrial protein-coding genes (PCGs), (Gobionellinae) was selected as an outgroup to construct phylogenetic trees of Sicydiinae using the maximum likelihood and Bayesian inference methods. The mitochondrial genome of (GenBank number: OP764680) has a total length of 16,498 bp and encodes 13 PCGs, 22 transfer RNA genes, two ribosomal RNA genes, and a D-loop (control) region. Gene rearrangement is not observed. The mitochondrial genome of exhibits an AT preference, with AT skew > 0 and GC skew < 0 across the entire genome. The phylogenetic relationships of Sicydiinae based on 13 mitochondrial PCG sequences are + ( + ( + )) + , indicating that , , , and are all monophyletic groups.