Details

Autor(en) / Beteiligte

• Belser, Caroline
• Poulain, Julie
• Labadie, Karine
• Gavory, Frederick
• Alberti, Adriana
• Guy, Julie
• Carradec, Quentin
• Cruaud, Corinne
• Da Silva, Corinne
• Engelen, Stefan
• Mielle, Paul
• Perdereau, Aude
• Samson, Gaelle
• Gas, Shahinaz
• Voolstra, Christian R
• Galand, Pierre E
• Flores, J Michel
• Hume, Benjamin C C
• Perna, Gabriela
• Ziegler, Maren
• Ruscheweyh, Hans-Joachim
• Boissin, Emilie
• Romac, Sarah
• Bourdin, Guillaume
• Iwankow, Guillaume
• Moulin, Clémentine
• Paz García, David A
• Agostini, Sylvain
• Banaigs, Bernard
• Boss, Emmanuel
• Bowler, Chris
• de Vargas, Colomban
• Douville, Eric
• Forcioli, Didier
• Furla, Paola
• Gilson, Eric
• Lombard, Fabien
• Pesant, Stéphane
• Reynaud, Stéphanie
• Sunagawa, Shinichi
• Thomas, Olivier P
• Troublé, Romain
• Thurber, Rebecca Vega
• Zoccola, Didier
• Scarpelli, Claude
• Jacoby, E' Krame
• Oliveira, Pedro H
• Aury, Jean-Marc
• Allemand, Denis
• Planes, Serge
• Wincker, Patrick

Titel

Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Ist Teil von

• Scientific data, 2023-06, Vol.10 (1), p.326-326, Article 326

Ort / Verlag

England: Nature Publishing Group

Erscheinungsjahr

2023

Link zum Volltext

Quelle

EZB Electronic Journals Library

Beschreibungen/Notizen

• Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmental stresses. Key to coral resilience are the symbiotic interactions established within a complex holobiont, i.e. the multipartite assemblages comprising the coral host organism, endosymbiotic dinoflagellates, bacteria, archaea, fungi, and viruses. Tara Pacific is an ambitious project built upon the experience of previous Tara Oceans expeditions, and leveraging state-of-the-art sequencing technologies and analyses to dissect the biodiversity and biocomplexity of the coral holobiont screened across most archipelagos spread throughout the entire Pacific Ocean. Here we detail the Tara Pacific workflow for multi-omics data generation, from sample handling to nucleotide sequence data generation and deposition. This unique multidimensional framework also includes a large amount of concomitant metadata collected side-by-side that provide new assessments of coral reef biodiversity including micro-biodiversity and shape future investigations of coral reef dynamics and their fate in the Anthropocene.