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Lung Ultrasound for Early Diagnosis of Ventilator-Associated Pneumonia

Chest, 2016-04, Vol.149 (4), p.969-980

2016

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Transcriptional Adaptation of Drug-tolerant Mycobacterium tuberculosis During Treatment of Human Tuberculosis

The Journal of infectious diseases, 2015-09, Vol.212 (6), p.990-998

2015

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The virtual CF clinic: Implications for sputum microbiology

Journal of cystic fibrosis, 2021-07, Vol.20 (4), p.699-701

2021

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Adaptation of "Mycobacterium tuberculosis" to Impaired Host Immunity in HIV-Infected Patients

The Journal of infectious diseases, 2016-10, Vol.214 (8), p.1205-1211

2016

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Sputum is a surrogate for bronchoalveolar lavage for monitoring Mycobacterium tuberculosis transcriptional profiles in TB patients

Tuberculosis (Edinburgh, Scotland), 2016-09, Vol.100, p.89-94

2016

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Liquid culture enhances diagnosis of patients with milder forms of non-tuberculous mycobacterial lung disease

The international journal of tuberculosis and lung disease, 2017-03, Vol.21 (3), p.345-350

2017

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Incidence of co-infections and superinfections in hospitalized patients with COVID-19: a retrospective cohort study

Clinical microbiology and infection, 2021-01, Vol.27 (1), p.83-88

2021

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Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (13), p.4110-4115

2015

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Gallium disrupts bacterial iron metabolism and has therapeutic effects in mice and humans with lung infections

Science translational medicine, 2018-09, Vol.10 (460)

2018

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Molecular typing and antifungal susceptibility of Exophiala isolates from patients with cystic fibrosis

Journal of medical microbiology, 2012-09, Vol.61 (9), p.1226-1233

2012

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Biological exacerbation clusters demonstrate asthma and chronic obstructive pulmonary disease overlap with distinct mediator and microbiome profiles

Journal of allergy and clinical immunology, 2018-06, Vol.141 (6), p.2027-2036.e12

2018

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A patient-level pooled analysis of treatment-shortening regimens for drug-susceptible pulmonary tuberculosis

Nature medicine, 2018-11, Vol.24 (11), p.1708-1715

2018

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Recommendations for antibacterial therapy in adults with COVID-19 – an evidence based guideline

Clinical microbiology and infection, 2021-01, Vol.27 (1), p.61-66

2021

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Exhaled Mycobacterium tuberculosis output and detection of subclinical disease by face-mask sampling: prospective observational studies

The Lancet infectious diseases, 2020-05, Vol.20 (5), p.607-617

2020

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Unusual Aspergillus species in patients with cystic fibrosis

Medical mycology (Oxford), 2010-11, Vol.48 (O1), p.S10-S16

2010

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Potentially pathogenic airway bacteria and neutrophilic inflammation in treatment resistant severe asthma

PloS one, 2014-06, Vol.9 (6), p.e100645-e100645

2014

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Airway Mucus Hyperconcentration in Non-Cystic Fibrosis Bronchiectasis

American journal of respiratory and critical care medicine, 2020-03, Vol.201 (6), p.661-670

2020

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Inflammatory Endotype-associated Airway Microbiome in Chronic Obstructive Pulmonary Disease Clinical Stability and Exacerbations: A Multicohort Longitudinal Analysis

American journal of respiratory and critical care medicine, 2021-06, Vol.203 (12), p.1488-1502

2021

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Decade-long bacterial community dynamics in cystic fibrosis airways

Proceedings of the National Academy of Sciences - PNAS, 2012-04, Vol.109 (15), p.5809-5814

2012

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Xpert MTB/RIF and Xpert MTB/RIF Ultra assays for active tuberculosis and rifampicin resistance in children

Cochrane database of systematic reviews, 2020-08, Vol.8 (8), p.CD013359

2020

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Direct Whole-Genome Sequencing of Sputum Accurately Identifies Drug-Resistant Mycobacterium tuberculosis Faster than MGIT Culture Sequencing

Journal of clinical microbiology, 2018-08, Vol.56 (8)

2018

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Performance of a multiplex PCR pneumonia panel for the identification of respiratory pathogens and the main determinants of resistance from the lower respiratory tract specimens of adult patients in intensive care units

Journal of microbiology, immunology and infection, 2019-12, Vol.52 (6), p.920-928

2019

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Changes in Airway Microbiome and Inflammation with Ivacaftor Treatment in Patients with Cystic Fibrosis and the G551D Mutation

Annals of the American Thoracic Society, 2020-02, Vol.17 (2), p.212-220

2020

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Lung Ultrasound for Early Diagnosis of Ventilator-Associated Pneumonia

Transcriptional Adaptation of Drug-tolerant Mycobacterium tuberculosis During Treatment of Human Tuberculosis

The virtual CF clinic: Implications for sputum microbiology

Adaptation of "Mycobacterium tuberculosis" to Impaired Host Immunity in HIV-Infected Patients

Sputum is a surrogate for bronchoalveolar lavage for monitoring Mycobacterium tuberculosis transcriptional profiles in TB patients

Liquid culture enhances diagnosis of patients with milder forms of non-tuberculous mycobacterial lung disease

Incidence of co-infections and superinfections in hospitalized patients with COVID-19: a retrospective cohort study

Essential genome of Pseudomonas aeruginosa in cystic fibrosis sputum

Gallium disrupts bacterial iron metabolism and has therapeutic effects in mice and humans with lung infections

Molecular typing and antifungal susceptibility of Exophiala isolates from patients with cystic fibrosis

Biological exacerbation clusters demonstrate asthma and chronic obstructive pulmonary disease overlap with distinct mediator and microbiome profiles

A patient-level pooled analysis of treatment-shortening regimens for drug-susceptible pulmonary tuberculosis

Recommendations for antibacterial therapy in adults with COVID-19 – an evidence based guideline

Exhaled Mycobacterium tuberculosis output and detection of subclinical disease by face-mask sampling: prospective observational studies

Unusual Aspergillus species in patients with cystic fibrosis

Potentially pathogenic airway bacteria and neutrophilic inflammation in treatment resistant severe asthma

Airway Mucus Hyperconcentration in Non-Cystic Fibrosis Bronchiectasis

Inflammatory Endotype-associated Airway Microbiome in Chronic Obstructive Pulmonary Disease Clinical Stability and Exacerbations: A Multicohort Longitudinal Analysis

Decade-long bacterial community dynamics in cystic fibrosis airways

Xpert MTB/RIF and Xpert MTB/RIF Ultra assays for active tuberculosis and rifampicin resistance in children

Direct Whole-Genome Sequencing of Sputum Accurately Identifies Drug-Resistant Mycobacterium tuberculosis Faster than MGIT Culture Sequencing

Performance of a multiplex PCR pneumonia panel for the identification of respiratory pathogens and the main determinants of resistance from the lower respiratory tract specimens of adult patients in intensive care units

Longitudinal profiling of the lung microbiome in the AERIS study demonstrates repeatability of bacterial and eosinophilic COPD exacerbations

Changes in Airway Microbiome and Inflammation with Ivacaftor Treatment in Patients with Cystic Fibrosis and the G551D Mutation

The New Xpert MTB/RIF Ultra: Improving Detection of Mycobacterium tuberculosis and Resistance to Rifampin in an Assay Suitable for Point-of-Care Testing

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