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RIP‐Seq analysis of non‐PPR chloroplast editing factors reveals broad RNA interactions and enrichment of less efficiently translated RNAs by OZ1 and ORRM1 complexes

The Plant journal : for cell and molecular biology, 2024-03, Vol.117 (5), p.1528-1542

2024

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Library construction for next-generation sequencing: Overviews and challenges

BioTechniques, 2014-02, Vol.56 (2), p.61-77

2014

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Translation factor and RNA binding protein mRNA interactomes support broader RNA regulons for posttranscriptional control

The Journal of biological chemistry, 2023-10, Vol.299 (10), p.105195-105195, Article 105195

2023

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IGF2BP3-EGFR-AKT axis promotes breast cancer MDA-MB-231 cell growth

Biochimica et biophysica acta. Molecular cell research, 2023-12, Vol.1870 (8), p.119542-119542, Article 119542

2023

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CRISPR RNA-Dependent Binding and Cleavage of Endogenous RNAs by the Campylobacter jejuni Cas9

Molecular cell, 2018-03, Vol.69 (5), p.893-905.e7

2018

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Widespread RNA binding by chromatin-associated proteins

Genome Biology, 2016-02, Vol.17 (1), p.28-28, Article 28

2016

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Core spliceosomal Sm proteins as constituents of cytoplasmic mRNPs in plants

The Plant journal : for cell and molecular biology, 2020-08, Vol.103 (3), p.1155-1173

2020

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HNRNPA2B1 promotes multiple myeloma progression by increasing AKT3 expression via m6A-dependent stabilization of ILF3 mRNA

Journal of hematology and oncology, 2021-04, Vol.14 (1), p.54-54, Article 54

2021

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TRIM71 binds to IMP1 and is capable of positive and negative regulation of target RNAs

Cell cycle (Georgetown, Tex.), 2020-09, Vol.19 (18), p.2314-2326

2020

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STAU2 binds a complex RNA cargo that changes temporally with production of diverse intermediate progenitor cells during mouse corticogenesis

Development (Cambridge), 2021-08, Vol.148 (15)

2021

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CELF1 preferentially binds to exon-intron boundary and regulates alternative splicing in HeLa cells

Biochimica et biophysica acta. Gene regulatory mechanisms, 2017-09, Vol.1860 (9), p.911-921

2017

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circRIP: an accurate tool for identifying circRNA–RBP interactions

Briefings in bioinformatics, 2022-07, Vol.23 (4)

2022

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A post-translational regulatory switch on UPF1 controls targeted mRNA degradation

Genes & development, 2014-09, Vol.28 (17), p.1900-1916

2014

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A novel protein encoded by circHNRNPU promotes multiple myeloma progression by regulating the bone marrow microenvironment and alternative splicing

Journal of experimental & clinical cancer research, 2022-03, Vol.41 (1), p.85-85, Article 85

2022

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Systematic Analysis of Targets of Pumilio-Mediated mRNA Decay Reveals that PUM1 Repression by DNA Damage Activates Translesion Synthesis

Cell reports (Cambridge), 2020-05, Vol.31 (5), p.107542-107542, Article 107542

2020

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CLOCK interacts with RANBP9 and is involved in alternative splicing in spermatogenesis

Gene, 2018-02, Vol.642, p.199-204

2018

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MALAT1 long ncRNA promotes gastric cancer metastasis by suppressing PCDH10

Oncotarget, 2016-03, Vol.7 (11), p.12693-12703

2016

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Transcriptome-wide N6-methyladenosine (m6A) methylation profiling of long non-coding RNAs in ovarian endometriosis

Genomics (San Diego, Calif.), 2024-03, Vol.116 (2), p.110803-110803, Article 110803

2024

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Integrative omics indicate FMRP sequesters mRNA from translation and deadenylation in human neuronal cells

Molecular cell, 2022-12, Vol.82 (23), p.4564-4581.e11

2022

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Integrated Analysis of RNA-Binding Proteins in Glioma

Cancers, 2020-04, Vol.12 (4), p.892

2020

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The RNA-binding protein DND1 acts sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming

Development (Cambridge), 2019-07, Vol.146 (19)

2019

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The disease-associated proteins Drosophila Nab2 and Ataxin-2 interact with shared RNAs and coregulate neuronal morphology

Genetics (Austin), 2022-01, Vol.220 (1)

2022

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The transcript interactome of skeletal muscle RNA binding protein motif 3 (RBM3)

Physiological reports, 2023-02, Vol.11 (3), p.e15596-n/a

2023

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The CRISPR/Cas system in Neisseria meningitidis affects bacterial adhesion to human nasopharyngeal epithelial cells

RNA biology, 2019-04, Vol.16 (4), p.390-396

2019

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YB-3 substitutes YB-1 in global mRNA binding

RNA biology, 2020-04, Vol.17 (4), p.487-499

2020

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RIP‐Seq analysis of non‐PPR chloroplast editing factors reveals broad RNA interactions and enrichment of less efficiently translated RNAs by OZ1 and ORRM1 complexes

Library construction for next-generation sequencing: Overviews and challenges

Translation factor and RNA binding protein mRNA interactomes support broader RNA regulons for posttranscriptional control

IGF2BP3-EGFR-AKT axis promotes breast cancer MDA-MB-231 cell growth

CRISPR RNA-Dependent Binding and Cleavage of Endogenous RNAs by the Campylobacter jejuni Cas9

Widespread RNA binding by chromatin-associated proteins

Core spliceosomal Sm proteins as constituents of cytoplasmic mRNPs in plants

HNRNPA2B1 promotes multiple myeloma progression by increasing AKT3 expression via m6A-dependent stabilization of ILF3 mRNA

TRIM71 binds to IMP1 and is capable of positive and negative regulation of target RNAs

STAU2 binds a complex RNA cargo that changes temporally with production of diverse intermediate progenitor cells during mouse corticogenesis

CELF1 preferentially binds to exon-intron boundary and regulates alternative splicing in HeLa cells

circRIP: an accurate tool for identifying circRNA–RBP interactions

A post-translational regulatory switch on UPF1 controls targeted mRNA degradation

A novel protein encoded by circHNRNPU promotes multiple myeloma progression by regulating the bone marrow microenvironment and alternative splicing

Systematic Analysis of Targets of Pumilio-Mediated mRNA Decay Reveals that PUM1 Repression by DNA Damage Activates Translesion Synthesis

CLOCK interacts with RANBP9 and is involved in alternative splicing in spermatogenesis

MALAT1 long ncRNA promotes gastric cancer metastasis by suppressing PCDH10

Transcriptome-wide N6-methyladenosine (m6A) methylation profiling of long non-coding RNAs in ovarian endometriosis

Integrative omics indicate FMRP sequesters mRNA from translation and deadenylation in human neuronal cells

Integrated Analysis of RNA-Binding Proteins in Glioma

The RNA-binding protein DND1 acts sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming

The disease-associated proteins Drosophila Nab2 and Ataxin-2 interact with shared RNAs and coregulate neuronal morphology

The transcript interactome of skeletal muscle RNA binding protein motif 3 (RBM3)

The CRISPR/Cas system in Neisseria meningitidis affects bacterial adhesion to human nasopharyngeal epithelial cells

YB-3 substitutes YB-1 in global mRNA binding

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