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T Cell Antigen Receptor Recognition of Antigen-Presenting Molecules

Annual review of immunology, 2015-01, Vol.33 (1), p.169-200

2015

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Imputing amino acid polymorphisms in human leukocyte antigens

PloS one, 2013-06, Vol.8 (6), p.e64683-e64683

2013

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SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition

Nature immunology, 2021-01, Vol.22 (1), p.74

2021

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Development of epitope‐based peptide vaccine against novel coronavirus 2019 (SARS‐COV‐2): Immunoinformatics approach

Journal of medical virology, 2020-06, Vol.92 (6), p.618-631

2020

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Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2

Journal of human genetics, 2020-07, Vol.65 (7), p.569-575

2020

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Mapping the HLA ligandome landscape of acute myeloid leukemia: a targeted approach toward peptide-based immunotherapy

Leukemia, 2015-03, Vol.29 (3), p.647-659

2015

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Exploring the out of sight antigens of SARS-CoV-2 to design a candidate multi-epitope vaccine by utilizing immunoinformatics approaches

Vaccine, 2020-11, Vol.38 (48), p.7612-7628

2020

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Genome-wide CRISPR-Cas9 screening reveals ubiquitous T cell cancer targeting via the monomorphic MHC class I-related protein MR1

Nature immunology, 2020-02, Vol.21 (2), p.178

2020

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NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data

Nucleic acids research, 2020-07, Vol.48 (W1), p.W449

2020

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MR1 presents microbial vitamin B metabolites to MAIT cells

Nature (London), 2012-11, Vol.491 (7426), p.717-723

2012

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The Role of MHC-E in T Cell Immunity Is Conserved among Humans, Rhesus Macaques, and Cynomolgus Macaques

The Journal of immunology (1950), 2018-01, Vol.200 (1), p.49-60

2018

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Deciphering HLA-I motifs across HLA peptidomes improves neo-antigen predictions and identifies allostery regulating HLA specificity

PLoS computational biology, 2017-08, Vol.13 (8), p.e1005725

2017

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Recognition of the antigen-presenting molecule MR1 by a Vδ3 + γδ T cell receptor

Proceedings of the National Academy of Sciences - PNAS, 2021-12, Vol.118 (49)

2021

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Biological Consequences of MHC-II Expression by Tumor Cells in Cancer

Clinical cancer research, 2019-04, Vol.25 (8), p.2392-2402

2019

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Antigen specificities and functional properties of MR1-restricted T cells

Molecular immunology, 2021-02, Vol.130, p.148-153

2021

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ELM-MHC: An Improved MHC Identification Method with Extreme Learning Machine Algorithm

Journal of proteome research, 2019-03, Vol.18 (3), p.1392-1401

2019

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A large peptidome dataset improves HLA class I epitope prediction across most of the human population

Nature biotechnology, 2020-02, Vol.38 (2), p.199-209

2020

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The immunopeptidomic landscape of ovarian carcinomas

Proceedings of the National Academy of Sciences - PNAS, 2017-11, Vol.114 (46), p.E9942-E9951

2017

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How TCRs bind MHCs, peptides, and coreceptors

Annual Review of Immunology, 2006-01, Vol.24 (1), p.419-466

2006

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Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes

PLoS computational biology, 2018-11, Vol.14 (11), p.e1006457-e1006457

2018

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MAIT cells are imprinted by the microbiota in early life and promote tissue repair

Science (American Association for the Advancement of Science), 2019-10, Vol.366 (6464)

2019

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Antigen presentation in cancer: insights into tumour immunogenicity and immune evasion

Nature reviews. Cancer, 2021-05, Vol.21 (5), p.298

2021

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Presumption of guilt for T cells in type 1 diabetes: lead culprits or partners in crime depending on age of onset?

Diabetologia, 2021-01, Vol.64 (1), p.15-25

2021

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Discovery of an ancient MHC category with both class I and class II features

Proceedings of the National Academy of Sciences - PNAS, 2021-12, Vol.118 (51)

2021

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T Cell Antigen Receptor Recognition of Antigen-Presenting Molecules

Imputing amino acid polymorphisms in human leukocyte antigens

SARS-CoV-2-derived peptides define heterologous and COVID-19-induced T cell recognition

Development of epitope‐based peptide vaccine against novel coronavirus 2019 (SARS‐COV‐2): Immunoinformatics approach

Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2

Mapping the HLA ligandome landscape of acute myeloid leukemia: a targeted approach toward peptide-based immunotherapy

Exploring the out of sight antigens of SARS-CoV-2 to design a candidate multi-epitope vaccine by utilizing immunoinformatics approaches

Genome-wide CRISPR-Cas9 screening reveals ubiquitous T cell cancer targeting via the monomorphic MHC class I-related protein MR1

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data

Amino acid signatures of HLA Class-I and II molecules are strongly associated with SLE susceptibility and autoantibody production in Eastern Asians

MR1 presents microbial vitamin B metabolites to MAIT cells

The Role of MHC-E in T Cell Immunity Is Conserved among Humans, Rhesus Macaques, and Cynomolgus Macaques

Deciphering HLA-I motifs across HLA peptidomes improves neo-antigen predictions and identifies allostery regulating HLA specificity

Recognition of the antigen-presenting molecule MR1 by a Vδ3 + γδ T cell receptor

Biological Consequences of MHC-II Expression by Tumor Cells in Cancer

Antigen specificities and functional properties of MR1-restricted T cells

ELM-MHC: An Improved MHC Identification Method with Extreme Learning Machine Algorithm

A large peptidome dataset improves HLA class I epitope prediction across most of the human population

The immunopeptidomic landscape of ovarian carcinomas

How TCRs bind MHCs, peptides, and coreceptors

Systematically benchmarking peptide-MHC binding predictors: From synthetic to naturally processed epitopes

MAIT cells are imprinted by the microbiota in early life and promote tissue repair

Antigen presentation in cancer: insights into tumour immunogenicity and immune evasion

Presumption of guilt for T cells in type 1 diabetes: lead culprits or partners in crime depending on age of onset?

Discovery of an ancient MHC category with both class I and class II features

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