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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

Nature (London), 2010-03, Vol.464 (7287), p.367-373

2010

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Accessory Chromosomes in Fusarium oxysporum

Phytopathology, 2020-09, Vol.110 (9), p.1488-1496

2020

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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

Science (American Association for the Advancement of Science), 2012-06, Vol.336 (6089), p.1715-1719

2012

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Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens

Environmental microbiology, 2017-08, Vol.19 (8), p.2964-2983

2017

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Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris

Genetics (Austin), 2021-05, Vol.218 (1)

2021

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10KP: A phylodiverse genome sequencing plan

Gigascience, 2018-03, Vol.7 (3), p.1-9

2018

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Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

Genome Biology, 2011-01, Vol.12 (4), p.R40-R40, Article R40

2011

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Fungal Genomes and Insights into the Evolution of the Kingdom

Microbiology spectrum, 2017-07, Vol.5 (4)

2017

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Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

Proceedings of the National Academy of Sciences - PNAS, 2009-09, Vol.106 (38), p.16151-16156

2009

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The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

BMC genomics, 2011-05, Vol.12 (1), p.269-269, Article 269

2011

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Highly Contiguous Genome Resource of Colletotrichum fructicola Generated Using Long-Read Sequencing

Molecular plant-microbe interactions, 2020-06, Vol.33 (6), p.790-793

2020

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The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species

BMC genomics, 2015-03, Vol.16 (1), p.239-239, Article 239

2015

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Comprehensive profiling of the fission yeast transcription start site activity during stress and media response

Nucleic acids research, 2019-02, Vol.47 (4), p.1671

2019

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Mind the gap; seven reasons to close fragmented genome assemblies

Fungal genetics and biology, 2016-05, Vol.90, p.24-30

2016

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A yeast living ancestor reveals the origin of genomic introgressions

Nature (London), 2020-11, Vol.587 (7834), p.420-425

2020

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Prevalence of transcription factors in ascomycete and basidiomycete fungi

BMC genomics, 2014-03, Vol.15 (1), p.214-214

2014

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Assembly collapsing versus heterozygosity oversizing: detection of homokaryotic and heterokaryotic Laccaria trichodermophora strains by hybrid genome assembly

Microbial genomics, 2024-03, Vol.10 (3)

2024

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Fungal diversity of “Tomme d'Orchies” cheese during the ripening process as revealed by a metagenomic study

International journal of food microbiology, 2017-10, Vol.258, p.89-93

2017

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Combination of Proteogenomics with Peptide De Novo Sequencing Identifies New Genes and Hidden Posttranscriptional Modifications

mBio, 2019-10, Vol.10 (5)

2019

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Generation and Analysis of Chromosomal Contact Maps of Yeast Species

Methods in molecular biology (Clifton, N.J.), 2016, Vol.1361, p.227

2016

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Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus

BMC genomics, 2018-11, Vol.19 (1), p.789-789, Article 789

2018

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Annotation of microsporidian genomes using transcriptional signals

Nature communications, 2012, Vol.3 (1), p.1137-1137, Article 1137

2012

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A genome wide dosage suppressor network reveals genomic robustness

Nucleic acids research, 2017-01, Vol.45 (1), p.255

2017

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Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life

Proceedings of the National Academy of Sciences - PNAS, 2012-12, Vol.109 (52), p.21402-21407

2012

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Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

Accessory Chromosomes in Fusarium oxysporum

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

Comparative genomics of Mortierella elongata and its bacterial endosymbiont Mycoavidus cysteinexigens

Clade-specific chromosomal rearrangements and loss of subtelomeric adhesins in Candida auris

10KP: A phylodiverse genome sequencing plan

Proteogenomics produces comprehensive and highly accurate protein-coding gene annotation in a complete genome assembly of Malassezia sympodialis

Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

Fungal Genomes and Insights into the Evolution of the Kingdom

Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

Highly Contiguous Genome Resource of Colletotrichum fructicola Generated Using Long-Read Sequencing

The Alternaria genomes database: a comprehensive resource for a fungal genus comprised of saprophytes, plant pathogens, and allergenic species

Comprehensive profiling of the fission yeast transcription start site activity during stress and media response

Mind the gap; seven reasons to close fragmented genome assemblies

A yeast living ancestor reveals the origin of genomic introgressions

Prevalence of transcription factors in ascomycete and basidiomycete fungi

Assembly collapsing versus heterozygosity oversizing: detection of homokaryotic and heterokaryotic Laccaria trichodermophora strains by hybrid genome assembly

Fungal diversity of “Tomme d'Orchies” cheese during the ripening process as revealed by a metagenomic study

Combination of Proteogenomics with Peptide De Novo Sequencing Identifies New Genes and Hidden Posttranscriptional Modifications

Generation and Analysis of Chromosomal Contact Maps of Yeast Species

Genomic discovery of the hypsin gene and biosynthetic pathways for terpenoids in Hypsizygus marmoreus

Annotation of microsporidian genomes using transcriptional signals

A genome wide dosage suppressor network reveals genomic robustness

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life

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