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Metagenomic analysis further extends the role of Chloroflexi in fundamental biogeochemical cycles

Environmental research, 2022-06, Vol.209, p.112888-112888, Article 112888

2022

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Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs

The ISME Journal, 2020-02, Vol.14 (2), p.364-379

2020

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Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi

International journal of systematic and evolutionary microbiology, 2013-02, Vol.63 (Pt 2), p.625-635

2013

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Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi

The ISME Journal, 2012-12, Vol.6 (12), p.2245-2256

2012

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Two Chloroflexi classes independently evolved the ability to persist on atmospheric hydrogen and carbon monoxide

The ISME Journal, 2019-07, Vol.13 (7), p.1801-1813

2019

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De novo production of resveratrol from glucose or ethanol by engineered Saccharomyces cerevisiae

Metabolic engineering, 2015-11, Vol.32, p.1-11

2015

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Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes

The ISME Journal, 2017-12, Vol.11 (12), p.2767-2780

2017

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The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling

The ISME Journal, 2018-03, Vol.12 (3), p.655-668

2018

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454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

FEMS microbiology ecology, 2013-09, Vol.85 (3), p.612-626

2013

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Identification of a multi-protein reductive dehalogenase complex in Dehalococcoides mccartyi strain CBDB1 suggests a protein-dependent respiratory electron transport chain obviating quinone involvement

Environmental microbiology, 2016-09, Vol.18 (9), p.3044-3056

2016

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Iterative subtractive binning of freshwater chronoseries metagenomes identifies over 400 novel species and their ecologic preferences

Environmental microbiology, 2020-08, Vol.22 (8), p.3394-3412

2020

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Effect of increasing total solids contents on anaerobic digestion of food waste under mesophilic conditions: performance and microbial characteristics analysis

PloS one, 2014-07, Vol.9 (7), p.e102548

2014

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Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi

The ISME Journal, 2014-02, Vol.8 (2), p.383-397

2014

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Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa

Scientific reports, 2017-07, Vol.7 (1), p.4837-11, Article 4837

2017

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Cryo-EM structure of the RC-LH core complex from an early branching photosynthetic prokaryote

Nature communications, 2018-04, Vol.9 (1), p.1568-10, Article 1568

2018

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Antibiotic resistance and microbiota in the gut of Chinese four major freshwater carp from retail markets

Environmental pollution (1987), 2019-12, Vol.255 (Pt 2), p.113327-113327, Article 113327

2019

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Ecological and genomic analyses of candidate phylum WPS‐2 bacteria in an unvegetated soil

Environmental microbiology, 2020-08, Vol.22 (8), p.3143-3157

2020

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The preterm placental microbiome varies in association with excess maternal gestational weight gain

American journal of obstetrics and gynecology, 2015-05, Vol.212 (5), p.653.e1-653.e16

2015

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In situ meta‐omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench

Environmental microbiology, 2019-11, Vol.21 (11), p.4092-4108

2019

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Biochemistry of Catabolic Reductive Dehalogenation

Annual review of biochemistry, 2017-06, Vol.86 (1), p.357-386

2017

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The morphology and metabolic potential of the Chloroflexi in full-scale activated sludge wastewater treatment plants

FEMS microbiology ecology, 2019-02, Vol.95 (2), p.1

2019

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Metabolic strategies of marine subseafloor Chloroflexi inferred from genome reconstructions

Environmental microbiology, 2020-08, Vol.22 (8), p.3188-3204

2020

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Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin

The ISME Journal, 2014-09, Vol.8 (9), p.1831-1842

2014

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The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey

Environmental microbiology, 2015-05, Vol.17 (5), p.1707-1720

2015

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Widespread microbial mercury methylation genes in the global ocean

Environmental microbiology reports, 2020-06, Vol.12 (3), p.277-287

2020

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Metagenomic analysis further extends the role of Chloroflexi in fundamental biogeochemical cycles

Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs

Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi

Two Chloroflexi classes independently evolved the ability to persist on atmospheric hydrogen and carbon monoxide

De novo production of resveratrol from glucose or ethanol by engineered Saccharomyces cerevisiae

Grape pomace compost harbors organohalide-respiring Dehalogenimonas species with novel reductive dehalogenase genes

The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling

454 pyrosequencing analyses of bacterial and archaeal richness in 21 full-scale biogas digesters

Identification of a multi-protein reductive dehalogenase complex in Dehalococcoides mccartyi strain CBDB1 suggests a protein-dependent respiratory electron transport chain obviating quinone involvement

Iterative subtractive binning of freshwater chronoseries metagenomes identifies over 400 novel species and their ecologic preferences

Effect of increasing total solids contents on anaerobic digestion of food waste under mesophilic conditions: performance and microbial characteristics analysis

Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi

Soil bacterial quantification approaches coupling with relative abundances reflecting the changes of taxa

Cryo-EM structure of the RC-LH core complex from an early branching photosynthetic prokaryote

Antibiotic resistance and microbiota in the gut of Chinese four major freshwater carp from retail markets

Ecological and genomic analyses of candidate phylum WPS‐2 bacteria in an unvegetated soil

The preterm placental microbiome varies in association with excess maternal gestational weight gain

In situ meta‐omic insights into the community compositions and ecological roles of hadal microbes in the Mariana Trench

Biochemistry of Catabolic Reductive Dehalogenation

The morphology and metabolic potential of the Chloroflexi in full-scale activated sludge wastewater treatment plants

Metabolic strategies of marine subseafloor Chloroflexi inferred from genome reconstructions

Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin

The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey

Widespread microbial mercury methylation genes in the global ocean

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