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The Madness of Microbiome: Attempting To Find Consensus "Best Practice" for 16S Microbiome Studies

Applied and environmental microbiology, 2018-04, Vol.84 (7), p.e02627-17

2018

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Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery

Nature biotechnology, 2019-08, Vol.37 (8), p.953-961

2019

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Assembly of hundreds of novel bacterial genomes from the chicken caecum

Genome Biology, 2020-02, Vol.21 (1), p.34-34, Article 34

2020

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Successful test launch for nanopore sequencing

Nature methods, 2015-03, Vol.12 (4), p.303

2015

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Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

Nature communications, 2018-02, Vol.9 (1), p.870-11, Article 870

2018

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Metagenomic analysis of the cow, sheep, reindeer and red deer rumen

Scientific reports, 2021-01, Vol.11 (1), p.1990-1990, Article 1990

2021

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Livestock 2.0 - genome editing for fitter, healthier, and more productive farmed animals

Genome Biology, 2018-11, Vol.19 (1), p.204-204, Article 204

2018

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Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene Abundance

PLoS genetics, 2016-02, Vol.12 (2), p.e1005846-e1005846

2016

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Exome Sequencing: Current and Future Perspectives

G3 : genes - genomes - genetics, 2015-08, Vol.5 (8), p.1543-1550

2015

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1200 high-quality metagenome-assembled genomes from the rumen of African cattle and their relevance in the context of sub-optimal feeding

Genome Biology, 2020-09, Vol.21 (1), p.229-229, Article 229

2020

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Effect of cecal microbiota transplantation between different broiler breeds on the chick flora in the first week of life

Poultry science, 2022-02, Vol.101 (2), p.101624-101624, Article 101624

2022

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Errors in long-read assemblies can critically affect protein prediction

Nature biotechnology, 2019-02, Vol.37 (2), p.124-126

2019

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Knockdown of piRNA pathway proteins results in enhanced Semliki Forest virus production in mosquito cells

Journal of general virology, 2013-07, Vol.94 (Pt 7), p.1680-1689

2013

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Development of the duodenal, ileal, jejunal and caecal microbiota in chickens

Animal microbiome, 2019-11, Vol.1 (1), p.17-17, Article 17

2019

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When will 'open science' become simply 'science'?

Genome Biology, 2015-05, Vol.16 (1), p.101-101, Article 101

Watson, Mick

2015

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Author Correction: Assembly of hundreds of novel bacterial genomes from the chicken caecum

Genome Biology, 2021-02, Vol.22 (1), p.60-60, Article 60

2021

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A high resolution atlas of gene expression in the domestic sheep (Ovis aries)

PLoS genetics, 2017-09, Vol.13 (9), p.e1006997-e1006997

2017

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MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach

Gigascience, 2017-03, Vol.6 (3), p.1-10

2017

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Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

Genome Biology, 2019-08, Vol.20 (1), p.153-153, Article 153

2019

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An Avian Retrovirus Uses Canonical Expression and Processing Mechanisms To Generate Viral MicroRNA

Journal of Virology, 2014-01, Vol.88 (1), p.2-9

2014

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The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle

Microbiome, 2017-12, Vol.5 (1), p.159-11, Article 159

2017

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Identification of Complex Rumen Microbiome Interaction Within Diverse Functional Niches as Mechanisms Affecting the Variation of Methane Emissions in Bovine

Frontiers in microbiology, 2020-04, Vol.11, p.659-659

2020

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Characterisation of the British honey bee metagenome

Nature communications, 2018-11, Vol.9 (1), p.4995-13, Article 4995

2018

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OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units

mSphere, 2017-03, Vol.2 (2)

2017

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Identification, Comparison, and Validation of Robust Rumen Microbial Biomarkers for Methane Emissions Using Diverse Bos Taurus Breeds and Basal Diets

Frontiers in microbiology, 2018-01, Vol.8, p.2642-2642

2018

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The Madness of Microbiome: Attempting To Find Consensus "Best Practice" for 16S Microbiome Studies

Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery

Assembly of hundreds of novel bacterial genomes from the chicken caecum

Successful test launch for nanopore sequencing

Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

Metagenomic analysis of the cow, sheep, reindeer and red deer rumen

Livestock 2.0 - genome editing for fitter, healthier, and more productive farmed animals

Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene Abundance

Exome Sequencing: Current and Future Perspectives

1200 high-quality metagenome-assembled genomes from the rumen of African cattle and their relevance in the context of sub-optimal feeding

Effect of cecal microbiota transplantation between different broiler breeds on the chick flora in the first week of life

Errors in long-read assemblies can critically affect protein prediction

Knockdown of piRNA pathway proteins results in enhanced Semliki Forest virus production in mosquito cells

Development of the duodenal, ileal, jejunal and caecal microbiota in chickens

When will 'open science' become simply 'science'?

Author Correction: Assembly of hundreds of novel bacterial genomes from the chicken caecum

A high resolution atlas of gene expression in the domestic sheep (Ovis aries)

MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach

Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

An Avian Retrovirus Uses Canonical Expression and Processing Mechanisms To Generate Viral MicroRNA

The rumen microbiome as a reservoir of antimicrobial resistance and pathogenicity genes is directly affected by diet in beef cattle

Identification of Complex Rumen Microbiome Interaction Within Diverse Functional Niches as Mechanisms Affecting the Variation of Methane Emissions in Bovine

Characterisation of the British honey bee metagenome

OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units

Identification, Comparison, and Validation of Robust Rumen Microbial Biomarkers for Methane Emissions Using Diverse Bos Taurus Breeds and Basal Diets

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