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Tumor microenvironment derived exosomes pleiotropically modulate cancer cell metabolism

eLife, 2016-02, Vol.5, p.e10250-e10250

2016

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NetWalker: a contextual network analysis tool for functional genomics

BMC genomics, 2012-06, Vol.13 (1), p.282-282

2012

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A pan-cancer proteomic perspective on The Cancer Genome Atlas

Nature communications, 2014-05, Vol.5 (1), p.3887-3887, Article 3887

2014

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Metabolic shifts toward glutamine regulate tumor growth, invasion and bioenergetics in ovarian cancer

Molecular systems biology, 2014-05, Vol.10 (5), p.728-n/a

2014

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Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes

Proceedings of the National Academy of Sciences - PNAS, 2010-08, Vol.107 (35), p.15449-15454

2010

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Exploiting the PI3K/AKT Pathway for Cancer Drug Discovery

Nature reviews. Drug discovery, 2005-12, Vol.4 (12), p.988-1004

2005

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Identification of Optimal Drug Combinations Targeting Cellular Networks: Integrating Phospho-Proteomics and Computational Network Analysis

Cancer research (Chicago, Ill.), 2010-09, Vol.70 (17), p.6704-6714

2010

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A switch in the source of ATP production and a loss in capacity to perform glycolysis are hallmarks of hepatocyte failure in advance liver disease

Journal of hepatology, 2014-06, Vol.60 (6), p.1203-1211

2014

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Peritoneal Spread of Ovarian Cancer Harbors Therapeutic Vulnerabilities Regulated by FOXM1 and EGFR/ERBB2 Signaling

Cancer research (Chicago, Ill.), 2020-12, Vol.80 (24), p.5554-5568

2020

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G Protein Pathways

Science (American Association for the Advancement of Science), 2002-05, Vol.296 (5573), p.1636-1639

2002

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Use of data-biased random walks on graphs for the retrieval of context-specific networks from genomic data

PLoS computational biology, 2010-08, Vol.6 (8), p.e1000889

2010

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MAP Kinase Phosphatase as a Locus of Flexibility in a Mitogen-Activated Protein Kinase Signaling Network

Science (American Association for the Advancement of Science), 2002-08, Vol.297 (5583), p.1018-1023

2002

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The glucose‐deprivation network counteracts lapatinib‐induced toxicity in resistant ErbB2‐positive breast cancer cells

Molecular systems biology, 2012, Vol.8 (1), p.596-n/a

2012

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CD63-mediated cloaking of VEGF in small extracellular vesicles contributes to anti-VEGF therapy resistance

Cell reports (Cambridge), 2021-08, Vol.36 (7), p.109549-109549, Article 109549

2021

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The signaling petri net-based simulator: a non-parametric strategy for characterizing the dynamics of cell-specific signaling networks

PLoS computational biology, 2008-02, Vol.4 (2), p.e1000005-e1000005

2008

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The ZNF304-integrin axis protects against anoikis in cancer

Nature communications, 2015-06, Vol.6 (1), p.7351-7351, Article 7351

2015

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Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network

Science (American Association for the Advancement of Science), 2005-08, Vol.309 (5737), p.1078-1083

2005

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Robust Selection Algorithm (RSA) for Multi-Omic Biomarker Discovery; Integration with Functional Network Analysis to Identify miRNA Regulated Pathways in Multiple Cancers

PloS one, 2015-10, Vol.10 (10), p.e0140072-e0140072

2015

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Molecular Analysis of Short- versus Long-Term Survivors of High-Grade Serous Ovarian Carcinoma

Cancers, 2022-08, Vol.14 (17), p.4198

2022

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Mapping network motif tunability and robustness in the design of synthetic signaling circuits

PloS one, 2014-03, Vol.9 (3), p.e91743-e91743

2014

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Cancer Systems Biology: a peek into the future of patient care?

Nature reviews. Clinical oncology, 2014-03, Vol.11 (3), p.167-176

2014

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Targeting Src in Mucinous Ovarian Carcinoma

Clinical cancer research, 2011-08, Vol.17 (16), p.5367-5378

2011

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Tumour angiogenesis regulation by the miR-200 family

Nature communications, 2013-01, Vol.4 (1), p.2427-2427, Article 2427

2013

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Targeting Stromal Glutamine Synthetase in Tumors Disrupts Tumor Microenvironment-Regulated Cancer Cell Growth

Tumor microenvironment derived exosomes pleiotropically modulate cancer cell metabolism

NetWalker: a contextual network analysis tool for functional genomics

A pan-cancer proteomic perspective on The Cancer Genome Atlas

Metabolic shifts toward glutamine regulate tumor growth, invasion and bioenergetics in ovarian cancer

Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes

Exploiting the PI3K/AKT Pathway for Cancer Drug Discovery

Identification of Optimal Drug Combinations Targeting Cellular Networks: Integrating Phospho-Proteomics and Computational Network Analysis

A switch in the source of ATP production and a loss in capacity to perform glycolysis are hallmarks of hepatocyte failure in advance liver disease

Peritoneal Spread of Ovarian Cancer Harbors Therapeutic Vulnerabilities Regulated by FOXM1 and EGFR/ERBB2 Signaling

G Protein Pathways

Use of data-biased random walks on graphs for the retrieval of context-specific networks from genomic data

Sustained Adrenergic Signaling Promotes Intratumoral Innervation through BDNF Induction

MAP Kinase Phosphatase as a Locus of Flexibility in a Mitogen-Activated Protein Kinase Signaling Network

The glucose‐deprivation network counteracts lapatinib‐induced toxicity in resistant ErbB2‐positive breast cancer cells

CD63-mediated cloaking of VEGF in small extracellular vesicles contributes to anti-VEGF therapy resistance

The signaling petri net-based simulator: a non-parametric strategy for characterizing the dynamics of cell-specific signaling networks

The ZNF304-integrin axis protects against anoikis in cancer

Formation of Regulatory Patterns During Signal Propagation in a Mammalian Cellular Network

Robust Selection Algorithm (RSA) for Multi-Omic Biomarker Discovery; Integration with Functional Network Analysis to Identify miRNA Regulated Pathways in Multiple Cancers

Molecular Analysis of Short- versus Long-Term Survivors of High-Grade Serous Ovarian Carcinoma

Mapping network motif tunability and robustness in the design of synthetic signaling circuits

Cancer Systems Biology: a peek into the future of patient care?

Targeting Src in Mucinous Ovarian Carcinoma

Tumour angiogenesis regulation by the miR-200 family

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