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Flexible Cullins in Cullin-RING E3 Ligases Allosterically Regulate Ubiquitination

The Journal of biological chemistry, 2011-11, Vol.286 (47), p.40934-40942

2011

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Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima

Journal of molecular biology, 2008-11, Vol.383 (2), p.281-291

2008

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Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non‐enzyme families

Protein science, 2006-09, Vol.15 (9), p.2120-2128

2006

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A new, structurally nonredundant, diverse data set of protein–protein interfaces and its implications

Protein science, 2004-04, Vol.13 (4), p.1043-1055

2004

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Point Mutations and Sequence Variability in Proteins: Redistributions of Preexisting Populations

Proceedings of the National Academy of Sciences - PNAS, 2001-03, Vol.98 (6), p.3139-3144

2001

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Interconversion of functional motions between mesophilic and thermophilic adenylate kinases

PLoS computational biology, 2011-07, Vol.7 (7), p.e1002103-e1002103

2011

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Maximal Stabilities of Reversible Two-State Proteins

Biochemistry (Easton), 2002-04, Vol.41 (17), p.5359-5374

2002

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Constructing templates for protein structure prediction by simulation of protein folding pathways

Proteins, structure, function, and bioinformatics, 2008-11, Vol.73 (2), p.380-394

2008

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Characterization of the Conformational State and Flexibility of HIV-1 Glycoprotein gp120 Core Domain

The Journal of biological chemistry, 2004-07, Vol.279 (29), p.30523-30530

2004

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The free energy landscape in translational science: how can somatic mutations result in constitutive oncogenic activation?

Physical chemistry chemical physics : PCCP, 2014-04, Vol.16 (14), p.6332-6341

2014

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Geometry-based flexible and symmetric protein docking

Proteins, structure, function, and bioinformatics, 2005-08, Vol.60 (2), p.224-231

2005

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Energy landscape and dynamics of the β‐hairpin G peptide and its isomers: Topology and sequences

Protein science, 2003-09, Vol.12 (9), p.1882-1893

2003

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Multiple structural alignment by secondary structures: Algorithm and applications

Protein science, 2003-11, Vol.12 (11), p.2492-2507

2003

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Modulating Functional Loop Movements: The Role of Highly Conserved Residues in the Correlated Loop Motions

Chembiochem : a European journal of chemical biology, 2004-02, Vol.5 (2), p.224-230

2004

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Experiment-guided thermodynamic simulations on reversible two-state proteins: implications for protein thermostability

Biophysical chemistry, 2004-11, Vol.111 (3), p.235-246

2004

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CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible

Journal of molecular biology, 2005-07, Vol.350 (3), p.514-527

2005

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Approaching the CAPRI challenge with an efficient geometry-based docking

Proteins, structure, function, and bioinformatics, 2005-08, Vol.60 (2), p.217-223

2005

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Interdomain Interactions in Hinge-Bending Transitions

Structure (London), 2001-12, Vol.9 (12), p.1165-1181

2001

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A proposed structural model for amyloid fibril elongation: domain swapping forms an interdigitating β-structure polymer

Protein engineering, 2001-02, Vol.14 (2), p.93-103

2001

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EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies

Acta crystallographica. Section D, Biological crystallography., 2007-01, Vol.63 (1), p.42-49

2007

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Thermal unfolding molecular dynamics simulation of Escherichia coli dihydrofolate reductase: Thermal stability of protein domains and unfolding pathway

Proteins, structure, function, and bioinformatics, 2002-02, Vol.46 (3), p.308-320

2002

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Comparison of protein fragments identified by limited proteolysis and by computational cutting of proteins

Protein science, 2002-07, Vol.11 (7), p.1753-1770

2002

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Protein Folding and Function: The N-Terminal Fragment in Adenylate Kinase

Biophysical journal, 2001-05, Vol.80 (5), p.2439-2454

2001

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A Systematic Study of the Vibrational Free Energies of Polypeptides in Folded and Random States

Biophysical journal, 2000-11, Vol.79 (5), p.2739-2753

2000

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Protein-Protein Interfaces: Architectures and Interactions in Protein-Protein Interfaces and in Protein Cores. Their Similarities and Differences

Critical reviews in biochemistry and molecular biology, 1996-01, Vol.31 (2), p.127-152

1996

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Flexible Cullins in Cullin-RING E3 Ligases Allosterically Regulate Ubiquitination

Synonymous Mutations and Ribosome Stalling Can Lead to Altered Folding Pathways and Distinct Minima

Residue centrality, functionally important residues, and active site shape: Analysis of enzyme and non‐enzyme families

A new, structurally nonredundant, diverse data set of protein–protein interfaces and its implications

Point Mutations and Sequence Variability in Proteins: Redistributions of Preexisting Populations

Interconversion of functional motions between mesophilic and thermophilic adenylate kinases

Maximal Stabilities of Reversible Two-State Proteins

Constructing templates for protein structure prediction by simulation of protein folding pathways

Characterization of the Conformational State and Flexibility of HIV-1 Glycoprotein gp120 Core Domain

The free energy landscape in translational science: how can somatic mutations result in constitutive oncogenic activation?

Geometry-based flexible and symmetric protein docking

Energy landscape and dynamics of the β‐hairpin G peptide and its isomers: Topology and sequences

Multiple structural alignment by secondary structures: Algorithm and applications

Modulating Functional Loop Movements: The Role of Highly Conserved Residues in the Correlated Loop Motions

Experiment-guided thermodynamic simulations on reversible two-state proteins: implications for protein thermostability

CD4 binding partially locks the bridging sheet in gp120 but leaves the beta2/3 strands flexible

Approaching the CAPRI challenge with an efficient geometry-based docking

Interdomain Interactions in Hinge-Bending Transitions

A proposed structural model for amyloid fibril elongation: domain swapping forms an interdigitating β-structure polymer

EMatch: an efficient method for aligning atomic resolution subunits into intermediate-resolution cryo-EM maps of large macromolecular assemblies

Thermal unfolding molecular dynamics simulation of Escherichia coli dihydrofolate reductase: Thermal stability of protein domains and unfolding pathway

Comparison of protein fragments identified by limited proteolysis and by computational cutting of proteins

Protein Folding and Function: The N-Terminal Fragment in Adenylate Kinase

A Systematic Study of the Vibrational Free Energies of Polypeptides in Folded and Random States

Protein-Protein Interfaces: Architectures and Interactions in Protein-Protein Interfaces and in Protein Cores. Their Similarities and Differences

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