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The Spectre of Too Many Species

Systematic biology, 2019-01, Vol.68 (1), p.168

2019

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Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus)

Proceedings of the Royal Society. B, Biological sciences, 2010-10, Vol.277 (1697), p.3071

2010

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The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics

Annual review of ecology, evolution, and systematics, 2017-11, Vol.48 (1), p.69-84

2017

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Andean uplift, drainage basin formation, and the evolution of plants living in fast‐flowing aquatic ecosystems in northern South America

The New phytologist, 2021-12, Vol.232 (5), p.2175-2190

2021

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The Influence of Gene Flow on Species Tree Estimation: A Simulation Study

Systematic biology, 2014-01, Vol.63 (1), p.17-30

2014

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Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies

Systematic biology, 2015-11, Vol.64 (6), p.1032-1047

2015

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Species Delimitation using Genome-Wide SNP Data

Systematic biology, 2014-07, Vol.63 (4), p.534-542

2014

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Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

Systematic biology, 2009-12, Vol.58 (6), p.547-559

Leaché, Adam D.

2009

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The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods

Systematic biology, 2011-03, Vol.60 (2), p.126-137

2011

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Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

Molecular phylogenetics and evolution, 2016-01, Vol.94 (Pt A), p.447-462

2016

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Evaluating mechanisms of diversification in a Guineo‐Congolian tropical forest frog using demographic model selection

Molecular ecology, 2017-10, Vol.26 (19), p.5245-5263

2017

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Population dynamics in newts of the Carpathian Mountains

Molecular ecology, 2023-08, Vol.32 (16), p.4464-4466

2023

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Phase Resolution of Heterozygous Sites in Diploid Genomes is Important to Phylogenomic Analysis under the Multispecies Coalescent Model

Systematic biology, 2022-02, Vol.71 (2), p.334

2022

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Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing

Genome biology and evolution, 2015-03, Vol.7 (3), p.706-719

2015

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Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)?

BMC evolutionary biology, 2016-03, Vol.16, p.63

2016

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Detecting the Anomaly Zone in Species Trees and Evidence for a Misleading Signal in Higher-Level Skink Phylogeny (Squamata: Scincidae)

Systematic biology, 2016-05, Vol.65 (3), p.465-477

2016

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Discordance between genomic divergence and phenotypic variation in a rapidly evolving avian genus (Motacilla)

Molecular phylogenetics and evolution, 2018-03, Vol.120, p.183-195

2018

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Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts

PLoS computational biology, 2020-10, Vol.16 (10), p.e1007999-e1007999

2020

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Population expansion, divergence, and persistence in Western Fence Lizards (Sceloporus occidentalis) at the northern extreme of their distributional range

Scientific reports, 2022-04, Vol.12 (1), p.6310-6310, Article 6310

2022

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Marginal Likelihoods in Phylogenetics: A Review of Methods and Applications

Systematic biology, 2019-09, Vol.68 (5), p.681

2019

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Biogeographic barriers and historic climate shape the phylogeography and demography of the common gartersnake

Journal of biogeography, 2023-12, Vol.50 (12), p.2012-2029

2023

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Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex (Phrynosoma)

Proceedings of the National Academy of Sciences - PNAS, 2009-07, Vol.106 (30), p.12418-12423

2009

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Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of diversity

Molecular phylogenetics and evolution, 2017-01, Vol.106, p.241-253

2017

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Comparative phylogeography of West African amphibians and reptiles

Evolution, 2020-04, Vol.74 (4), p.716-724

2020

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Evidence for ephemeral ring species formation during the diversification history of western fence lizards (Sceloporus occidentalis)

Molecular ecology, 2022-01, Vol.31 (2), p.620-631

2022

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The Spectre of Too Many Species

Bayesian species delimitation in West African forest geckos (Hemidactylus fasciatus)

The Utility of Single Nucleotide Polymorphism (SNP) Data in Phylogenetics

Andean uplift, drainage basin formation, and the evolution of plants living in fast‐flowing aquatic ecosystems in northern South America

The Influence of Gene Flow on Species Tree Estimation: A Simulation Study

Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies

Species Delimitation using Genome-Wide SNP Data

Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods

Implementing and testing the multispecies coalescent model: A valuable paradigm for phylogenomics

Evaluating mechanisms of diversification in a Guineo‐Congolian tropical forest frog using demographic model selection

Population dynamics in newts of the Carpathian Mountains

Phase Resolution of Heterozygous Sites in Diploid Genomes is Important to Phylogenomic Analysis under the Multispecies Coalescent Model

Phylogenomics of phrynosomatid lizards: conflicting signals from sequence capture versus restriction site associated DNA sequencing

Phylogenomics of a rapid radiation: is chromosomal evolution linked to increased diversification in north american spiny lizards (Genus Sceloporus)?

Detecting the Anomaly Zone in Species Trees and Evidence for a Misleading Signal in Higher-Level Skink Phylogeny (Squamata: Scincidae)

Discordance between genomic divergence and phenotypic variation in a rapidly evolving avian genus (Motacilla)

Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts

Population expansion, divergence, and persistence in Western Fence Lizards (Sceloporus occidentalis) at the northern extreme of their distributional range

Marginal Likelihoods in Phylogenetics: A Review of Methods and Applications

Biogeographic barriers and historic climate shape the phylogeography and demography of the common gartersnake

Quantifying ecological, morphological, and genetic variation to delimit species in the coast horned lizard species complex (Phrynosoma)

Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of diversity

Comparative phylogeography of West African amphibians and reptiles

Evidence for ephemeral ring species formation during the diversification history of western fence lizards (Sceloporus occidentalis)

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