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Planktonic Marine Archaea

Annual review of marine science, 2019-01, Vol.11, p.131

2019

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Patterns of thaumarchaeal gene expression in culture and diverse marine environments

Environmental microbiology, 2018-06, Vol.20 (6), p.2112-2124

2018

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The physiology and genetics of CO2 concentrating mechanisms in model diatoms

Current opinion in plant biology, 2016-06, Vol.31 (C), p.51-57

2016

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Microbial metagenomics: beyond the genome

Annual review of marine science, 2011-01, Vol.3 (1), p.347-371

2011

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Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

The ISME Journal, 2021-04, Vol.15 (4), p.1025-1039

2021

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Genomic and proteomic characterization of “Candidatus Nitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

Proceedings of the National Academy of Sciences - PNAS, 2015-01, Vol.112 (4), p.1173-1178

2015

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Efficiency of the CO₂-concentrating mechanism of diatoms

Proceedings of the National Academy of Sciences - PNAS, 2011-03, Vol.108 (10), p.3830-3837

2011

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Evolution and metabolic significance of the urea cycle in photosynthetic diatoms

Nature (London), 2011-05, Vol.473 (7346), p.203-207

2011

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Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom

PloS one, 2016-05, Vol.11 (5), p.e0155038-e0155038

2016

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Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom

The Plant cell, 2017-08, Vol.29 (8), p.2047-2070

2017

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History of biological metal utilization inferred through phylogenomic analysis of protein structures

Proceedings of the National Academy of Sciences - PNAS, 2010-06, Vol.107 (23), p.10567-10572

2010

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Pervasive iron limitation at subsurface chlorophyll maxima of the California Current

Proceedings of the National Academy of Sciences - PNAS, 2018-12, Vol.115 (52), p.13300-13305

2018

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Inactivation of Phaeodactylum tricornutum urease gene using transcription activator‐like effector nuclease‐based targeted mutagenesis

Plant biotechnology journal, 2015-05, Vol.13 (4), p.460-470

2015

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Interplay of Staphylococcal and Host Proteases Promotes Skin Barrier Disruption in Netherton Syndrome

Cell reports (Cambridge), 2020-03, Vol.30 (9), p.2923-2933.e7

2020

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Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures

Nature communications, 2023-09, Vol.14 (1), p.5918-5918, Article 5918

2023

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Modern Proteomes Contain Putative Imprints of Ancient Shifts in Trace Metal Geochemistry

Proceedings of the National Academy of Sciences - PNAS, 2006-11, Vol.103 (47), p.17822-17827

2006

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Characterization of Prochlorococcus clades from iron-depleted oceanic regions

Proceedings of the National Academy of Sciences - PNAS, 2010-09, Vol.107 (37), p.16184-16189

2010

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Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

Nature biotechnology, 2011-10, Vol.29 (10), p.915-921

2011

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Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

Proceedings of the National Academy of Sciences - PNAS, 2013-06, Vol.110 (26), p.E2390-E2399

2013

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Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant-cyanobacteria symbiosis

The ISME Journal, 2017-12, Vol.11 (12), p.2821-2833

2017

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Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea

The ISME Journal, 2014-09, Vol.8 (9), p.1892-1903

2014

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Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein

Proceedings of the National Academy of Sciences - PNAS, 2012-06, Vol.109 (26), p.10154-10155

2012

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Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution

PloS one, 2016-05, Vol.11 (5), p.e0155757-e0155757

2016

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Genomic and functional adaptation in surface ocean planktonic prokaryotes

Nature (London), 2010-11, Vol.468 (7320), p.60-66

2010

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Diatom centromeres suggest a mechanism for nuclear DNA acquisition

Proceedings of the National Academy of Sciences - PNAS, 2017-07, Vol.114 (29), p.E6015-E6024

2017

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Planktonic Marine Archaea

Patterns of thaumarchaeal gene expression in culture and diverse marine environments

The physiology and genetics of CO2 concentrating mechanisms in model diatoms

Microbial metagenomics: beyond the genome

Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

Genomic and proteomic characterization of “Candidatus Nitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

Efficiency of the CO₂-concentrating mechanism of diatoms

Evolution and metabolic significance of the urea cycle in photosynthetic diatoms

Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom

Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom

History of biological metal utilization inferred through phylogenomic analysis of protein structures

Pervasive iron limitation at subsurface chlorophyll maxima of the California Current

Inactivation of Phaeodactylum tricornutum urease gene using transcription activator‐like effector nuclease‐based targeted mutagenesis

Interplay of Staphylococcal and Host Proteases Promotes Skin Barrier Disruption in Netherton Syndrome

Genotypic diversity and unrecognized antifungal resistance among populations of Candida glabrata from positive blood cultures

Modern Proteomes Contain Putative Imprints of Ancient Shifts in Trace Metal Geochemistry

Characterization of Prochlorococcus clades from iron-depleted oceanic regions

Efficient de novo assembly of single-cell bacterial genomes from short-read data sets

Candidate phylum TM6 genome recovered from a hospital sink biofilm provides genomic insights into this uncultivated phylum

Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant-cyanobacteria symbiosis

Picocyanobacteria containing a novel pigment gene cluster dominate the brackish water Baltic Sea

Influence of cobalamin scarcity on diatom molecular physiology and identification of a cobalamin acquisition protein

Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution

Genomic and functional adaptation in surface ocean planktonic prokaryotes

Diatom centromeres suggest a mechanism for nuclear DNA acquisition

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