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The impact of recombination on nucleotide substitutions in the human genome

PLoS genetics, 2008-05, Vol.4 (5), p.e1000071-e1000071

2008

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Large scale variation in the rate of germ-line de novo mutation, base composition, divergence and diversity in humans

PLoS genetics, 2018-03, Vol.14 (3), p.e1007254-e1007254

2018

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Probing the SELEX process with next-generation sequencing

PloS one, 2011-12, Vol.6 (12), p.e29604-e29604

2011

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Modelling segmental duplications in the human genome

BMC genomics, 2021-07, Vol.22 (1), p.1-496, Article 496

2021

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Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain

eLife, 2021-06, Vol.10

2021

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Modeling gene expression cascades during cell state transitions

iScience, 2024-04, Vol.27 (4), p.109386-109386, Article 109386

2024

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Modeling the mosaic structure of bacterial genomes to infer their evolutionary history

Proceedings of the National Academy of Sciences - PNAS, 2024-03, Vol.121 (13), p.e2313367121

2024

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Statistical properties of pairwise distances between leaves on a random Yule tree

PloS one, 2015-03, Vol.10 (3), p.e0120206-e0120206

2015

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Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes

PLoS genetics, 2011-10, Vol.7 (10), p.e1002276-e1002276

2011

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Variation in the molecular clock of primates

Proceedings of the National Academy of Sciences - PNAS, 2016-09, Vol.113 (38), p.10607-10612

2016

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Single‐cell based high‐throughput sequencing of full‐length immunoglobulin heavy and light chain genes

European journal of immunology, 2014-02, Vol.44 (2), p.597-603

2014

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The evolution of transcription-associated biases of mutations across vertebrates

BMC evolutionary biology, 2010-06, Vol.10, p.187

2010

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Sequential and continuous time stick-breaking

Journal of statistical mechanics, 2019-06, Vol.2019 (6), p.64003

Arndt, Peter F

2019

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Genome-wide patterns and properties of de novo mutations in humans

Nature genetics, 2015-07, Vol.47 (7), p.822-826

2015

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Meiotic recombination strongly influences GC-content evolution in short regions in the mouse genome

Molecular biology and evolution, 2013-12, Vol.30 (12), p.2612-2618

2013

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Quantification of GC-biased gene conversion in the human genome

Genome research, 2015-08, Vol.25 (8), p.1215

2015

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sciReptor: analysis of single-cell level immunoglobulin repertoires

BMC bioinformatics, 2016-02, Vol.17 (44), p.67-67, Article 67

2016

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Neutral evolution of duplicated DNA: an evolutionary stick-breaking process causes scale-invariant behavior

Physical review letters, 2013-04, Vol.110 (14), p.148101-148101, Article 148101

2013

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Transcription induces strand-specific mutations at the 5' end of human genes

Genome Research, 2008-08, Vol.18 (8), p.1216-1223

2008

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Twisted signatures of GC-biased gene conversion embedded in an evolutionary stable karyotype

Molecular biology and evolution, 2013-07, Vol.30 (7), p.1700-1712

2013

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The information capacity of the genetic code: Is the natural code optimal?

Journal of theoretical biology, 2017-04, Vol.419, p.227-237

2017

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Evolutionary consequences of DNA methylation on the GC content in vertebrate genomes

G3 : genes - genomes - genetics, 2015-03, Vol.5 (3), p.441-447

2015

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Evolutionary dynamics of selfish DNA explains the abundance distribution of genomic subsequences

Scientific reports, 2016-08, Vol.6 (1), p.30851-30851, Article 30851

2016

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Comparing the Statistical Fate of Paralogous and Orthologous Sequences

Genetics (Austin), 2016-10, Vol.204 (2), p.475-482

2016

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The impact of recombination on nucleotide substitutions in the human genome

Large scale variation in the rate of germ-line de novo mutation, base composition, divergence and diversity in humans

Probing the SELEX process with next-generation sequencing

Modelling segmental duplications in the human genome

Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain

Modeling gene expression cascades during cell state transitions

Modeling the mosaic structure of bacterial genomes to infer their evolutionary history

Statistical properties of pairwise distances between leaves on a random Yule tree

Preventing dangerous nonsense: selection for robustness to transcriptional error in human genes

Variation in the molecular clock of primates

Single‐cell based high‐throughput sequencing of full‐length immunoglobulin heavy and light chain genes

The evolution of transcription-associated biases of mutations across vertebrates

Sequential and continuous time stick-breaking

Widespread Chromosomal Losses and Mitochondrial DNA Alterations as Genetic Drivers in Hürthle Cell Carcinoma

Genome-wide patterns and properties of de novo mutations in humans

Meiotic recombination strongly influences GC-content evolution in short regions in the mouse genome

Quantification of GC-biased gene conversion in the human genome

sciReptor: analysis of single-cell level immunoglobulin repertoires

Neutral evolution of duplicated DNA: an evolutionary stick-breaking process causes scale-invariant behavior

Transcription induces strand-specific mutations at the 5' end of human genes

Twisted signatures of GC-biased gene conversion embedded in an evolutionary stable karyotype

The information capacity of the genetic code: Is the natural code optimal?

Evolutionary consequences of DNA methylation on the GC content in vertebrate genomes

Evolutionary dynamics of selfish DNA explains the abundance distribution of genomic subsequences

Comparing the Statistical Fate of Paralogous and Orthologous Sequences

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