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NCMine: Core-peripheral based functional module detection using near-clique mining

Bioinformatics (Oxford, England), 2016-11, Vol.32 (22), p.3454-3460

2016

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Matataki: an ultrafast mRNA quantification method for large-scale reanalysis of RNA-Seq data

BMC bioinformatics, 2018-07, Vol.19 (1), p.266-266, Article 266

2018

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COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference

Nucleic acids research, 2019-01, Vol.47 (D1), p.D55

2019

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SR-B1 Is a Silica Receptor that Mediates Canonical Inflammasome Activation

Cell reports (Cambridge), 2017-01, Vol.18 (5), p.1298-1311

2017

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COXPRESdb: a database to compare gene coexpression in seven model animals

Nucleic acids research, 2011-01, Vol.39 (Database issue), p.D1016

2011

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Comparison of Gene Coexpression Profiles and Construction of Conserved Gene Networks to Find Functional Modules

PloS one, 2015-07, Vol.10 (7), p.e0132039-e0132039

2015

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Ion Concentration- and Voltage-Dependent Push and Pull Mechanisms of Potassium Channel Ion Conduction

PloS one, 2016-03, Vol.11 (3), p.e0150716-e0150716

2016

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COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D1014

2013

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Sex-Specific Differences in the Transcriptome of the Human Dorsolateral Prefrontal Cortex in Schizophrenia

Molecular neurobiology, 2023-02, Vol.60 (2), p.1083-1098

2023

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Tim4 recognizes carbon nanotubes and mediates phagocytosis leading to granuloma formation

Cell reports (Cambridge), 2021-02, Vol.34 (6), p.108734, Article 108734

2021

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A pro-diabetogenic mtDNA polymorphism in the mitochondrial-derived peptide, MOTS-c

Aging (Albany, NY.), 2021-01, Vol.13 (2), p.1692-1717

2021

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Guanine nucleotide‐binding protein 1 is one of the key molecules contributing to cancer cell radioresistance

Cancer science, 2014-10, Vol.105 (10), p.1351-1359

2014

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Inflammatory responses induce an identity crisis of alveolar macrophages, leading to pulmonary alveolar proteinosis

The Journal of biological chemistry, 2017-11, Vol.292 (44), p.18098-18112

2017

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COXPRESdb v8: an animal gene coexpression database navigating from a global view to detailed investigations

Nucleic acids research, 2023-01, Vol.51 (D1), p.D80

2023

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Zinc finger–IRF composite elements bound by Ikaros/IRF4 complexes function as gene repression in plasma cell

Blood advances, 2018-04, Vol.2 (8), p.883-894

2018

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Weak correlation between sequence conservation in promoter regions and in protein-coding regions of human-mouse orthologous gene pairs

BMC genomics, 2008-04, Vol.9 (1), p.152-152, Article 152

2008

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Similarities and differences in the structure and function of 4.1G and 4.1R135, two protein 4.1 paralogues expressed in erythroid cells

Biochemical journal, 2010-12, Vol.432 (2), p.407-416

2010

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COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems

Nucleic acids research, 2015-01, Vol.43 (Database issue), p.D82

2015

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Rank of Correlation Coefficient as a Comparable Measure for Biological Significance of Gene Coexpression

DNA research, 2009-10, Vol.16 (5), p.249-260

2009

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Solution structure of the RWD domain of the mouse GCN2 protein

Protein science, 2004-08, Vol.13 (8), p.2089-2100

2004

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Decreased β‐hydroxybutyrate and ketogenic amino acid levels in depressed human adults

The European journal of neuroscience, 2023-03, Vol.57 (6), p.1018-1032

2023

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Mutational Analysis of Block and Facilitation of HERG Current by A Class III Anti-Arrhythmic Agent, Nifekalant

Channels (Austin, Tex.), 2007-05, Vol.1 (3), p.198-208

2007

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DBTGR: a database of tunicate promoters and their regulatory elements

Nucleic acids research, 2006-01, Vol.34 (Database issue), p.D552

2006

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Structural basis for the membrane association of ankyrinG via palmitoylation

Scientific reports, 2016-04, Vol.6 (1), p.23981-23981, Article 23981

2016

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COXPRESdb: a database of coexpressed gene networks in mammals

Nucleic acids research, 2008-01, Vol.36 (Database issue), p.D77

2008

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NCMine: Core-peripheral based functional module detection using near-clique mining

Matataki: an ultrafast mRNA quantification method for large-scale reanalysis of RNA-Seq data

COXPRESdb v7: a gene coexpression database for 11 animal species supported by 23 coexpression platforms for technical evaluation and evolutionary inference

SR-B1 Is a Silica Receptor that Mediates Canonical Inflammasome Activation

COXPRESdb: a database to compare gene coexpression in seven model animals

Comparison of Gene Coexpression Profiles and Construction of Conserved Gene Networks to Find Functional Modules

Ion Concentration- and Voltage-Dependent Push and Pull Mechanisms of Potassium Channel Ion Conduction

COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals

Sex-Specific Differences in the Transcriptome of the Human Dorsolateral Prefrontal Cortex in Schizophrenia

Tim4 recognizes carbon nanotubes and mediates phagocytosis leading to granuloma formation

A pro-diabetogenic mtDNA polymorphism in the mitochondrial-derived peptide, MOTS-c

Guanine nucleotide‐binding protein 1 is one of the key molecules contributing to cancer cell radioresistance

Inflammatory responses induce an identity crisis of alveolar macrophages, leading to pulmonary alveolar proteinosis

COXPRESdb v8: an animal gene coexpression database navigating from a global view to detailed investigations

Zinc finger–IRF composite elements bound by Ikaros/IRF4 complexes function as gene repression in plasma cell

Weak correlation between sequence conservation in promoter regions and in protein-coding regions of human-mouse orthologous gene pairs

Similarities and differences in the structure and function of 4.1G and 4.1R135, two protein 4.1 paralogues expressed in erythroid cells

COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems

Rank of Correlation Coefficient as a Comparable Measure for Biological Significance of Gene Coexpression

Solution structure of the RWD domain of the mouse GCN2 protein

Decreased β‐hydroxybutyrate and ketogenic amino acid levels in depressed human adults

Mutational Analysis of Block and Facilitation of HERG Current by A Class III Anti-Arrhythmic Agent, Nifekalant

DBTGR: a database of tunicate promoters and their regulatory elements

Structural basis for the membrane association of ankyrinG via palmitoylation

COXPRESdb: a database of coexpressed gene networks in mammals

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