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Nanopore sequencing of full rRNA operon improves resolution in mycobiome analysis and reveals high diversity in both human gut and environments

Molecular ecology, 2023-12, Vol.32 (23), p.6330-6344

2023

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Microbial life strategy with high rRNA operon copy number facilitates the energy and nutrient flux in anaerobic digestion

Water research (Oxford), 2022-11, Vol.226, p.119307-119307, Article 119307

2022

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Benchmarking long‐read sequencing strategies for obtaining ASV‐resolved rRNA operons from environmental microeukaryotes

Molecular ecology resources, 2024-10, Vol.24 (7), p.e13991-n/a

2024

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Organization and Characterization of the Promoter Elements of the rRNA Operons in the Slow-Growing Pathogen Mycobacterium kumamotonense

Genes, 2023-04, Vol.14 (5), p.1023

2023

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rRNA Operon Copy Number Can Explain the Distinct Epidemiology of Hospital-Associated Methicillin-Resistant Staphylococcus aureus

Antimicrobial agents and chemotherapy, 2016-12, Vol.60 (12), p.7313-7320

2016

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Fitness Cost of Chromosomal Drug Resistance-Conferring Mutations

Antimicrobial Agents and Chemotherapy, 2002-05, Vol.46 (5), p.1204-1211

2002

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rRNA (rrn) Operon-Engineered Bacillus subtilis as a Feasible Test Organism for Antibiotic Discovery

Antimicrobial Agents and Chemotherapy, 2013-04, Vol.57 (4), p.1948-1951

2013

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Nutrient supply controls the linkage between species abundance and ecological interactions in marine bacterial communities

Nature communications, 2022-01, Vol.13 (1), p.175-175, Article 175

2022

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Quantitative relationships for specific growth rates and macromolecular compositions of Mycobacterium tuberculosis, Streptomyces coelicolor A3(2) and Escherichia coli B/r: an integrative theoretical approach

Microbiology (Society for General Microbiology), 2004-05, Vol.150 (Pt 5), p.1413-1426

Cox, Robert A

2004

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The Role of LRP and H-NS in Transcription Regulation: Involvement of Synergism, Allostery and Macromolecular Crowding

Journal of molecular biology, 2007-02, Vol.366 (3), p.900-915

2007

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Confident phylogenetic identification of uncultured prokaryotes through long read amplicon sequencing of the 16S‐ITS‐23S rRNA operon

Environmental microbiology, 2019-07, Vol.21 (7), p.2485-2498

2019

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Short‐ and long‐read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing

Molecular ecology resources, 2022-08, Vol.22 (6), p.2304-2318

2022

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Fire modulates ecosystem functioning through the phylogenetic structure of soil bacterial communities

Soil biology & biochemistry, 2019-02, Vol.129, p.80-89

2019

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Decreases in average bacterial community rRNA operon copy number during succession

The ISME Journal, 2016-05, Vol.10 (5), p.1147-1156

2016

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rRNA operon multiplicity as a bacterial genome stability insurance policy

Nucleic acids research, 2022-12, Vol.50 (22), p.12601-12620

2022

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Exploiting rRNA operon copy number to investigate bacterial reproductive strategies

Nature microbiology, 2016-09, Vol.1 (11), p.16160, Article 16160

2016

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Ribosomal RNA gene operon copy number, a functional trait indicating the hydrocarbon degradation level of bacterial communities

Journal of hazardous materials, 2023-10, Vol.459, p.132100-132100, Article 132100

2023

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Ribosomal RNA operons define a central functional compartment in the Streptomyces chromosome

Nucleic acids research, 2022-11, Vol.50 (20), p.11654-11669

2022

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Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators

Cell, 2018-06, Vol.173 (7), p.1650-1662.e14

2018

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Ribosomal and non‐ribosomal resistance to oxazolidinones: species‐specific idiosyncrasy of ribosomal alterations

Molecular microbiology, 2002-12, Vol.46 (5), p.1295-1304

2002

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Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession

The ISME Journal, 2018-07, Vol.12 (7), p.1658-1667

2018

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Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters

The ISME Journal, 2017-12, Vol.11 (12), p.2874-2878

2017

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Trait dimensions in bacteria and archaea compared to vascular plants

Ecology letters, 2021-07, Vol.24 (7), p.1487-1504

2021

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Harnessing the intragenomic variability of rRNA operons to improve differentiation of Vibrio species

Scientific reports, 2024-04, Vol.14 (1), p.9908-9908, Article 9908

2024

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RNA polymerase redistribution supports growth in E. coli strains with a minimal number of rRNA operons

Nucleic acids research, 2023-08, Vol.51 (15), p.8085-8101

2023

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Nanopore sequencing of full rRNA operon improves resolution in mycobiome analysis and reveals high diversity in both human gut and environments

Microbial life strategy with high rRNA operon copy number facilitates the energy and nutrient flux in anaerobic digestion

Benchmarking long‐read sequencing strategies for obtaining ASV‐resolved rRNA operons from environmental microeukaryotes

Organization and Characterization of the Promoter Elements of the rRNA Operons in the Slow-Growing Pathogen Mycobacterium kumamotonense

rRNA Operon Copy Number Can Explain the Distinct Epidemiology of Hospital-Associated Methicillin-Resistant Staphylococcus aureus

Fitness Cost of Chromosomal Drug Resistance-Conferring Mutations

rRNA (rrn) Operon-Engineered Bacillus subtilis as a Feasible Test Organism for Antibiotic Discovery

Nutrient supply controls the linkage between species abundance and ecological interactions in marine bacterial communities

Quantitative relationships for specific growth rates and macromolecular compositions of Mycobacterium tuberculosis, Streptomyces coelicolor A3(2) and Escherichia coli B/r: an integrative theoretical approach

The Role of LRP and H-NS in Transcription Regulation: Involvement of Synergism, Allostery and Macromolecular Crowding

Confident phylogenetic identification of uncultured prokaryotes through long read amplicon sequencing of the 16S‐ITS‐23S rRNA operon

Short‐ and long‐read metabarcoding of the eukaryotic rRNA operon: Evaluation of primers and comparison to shotgun metagenomics sequencing

Fire modulates ecosystem functioning through the phylogenetic structure of soil bacterial communities

Decreases in average bacterial community rRNA operon copy number during succession

rRNA operon multiplicity as a bacterial genome stability insurance policy

Exploiting rRNA operon copy number to investigate bacterial reproductive strategies

Ribosomal RNA gene operon copy number, a functional trait indicating the hydrocarbon degradation level of bacterial communities

Ribosomal RNA operons define a central functional compartment in the Streptomyces chromosome

Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators

Ribosomal and non‐ribosomal resistance to oxazolidinones: species‐specific idiosyncrasy of ribosomal alterations

Consistent changes in the taxonomic structure and functional attributes of bacterial communities during primary succession

Microbial functional trait of rRNA operon copy numbers increases with organic levels in anaerobic digesters

Trait dimensions in bacteria and archaea compared to vascular plants

Harnessing the intragenomic variability of rRNA operons to improve differentiation of Vibrio species

RNA polymerase redistribution supports growth in E. coli strains with a minimal number of rRNA operons

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