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De Novo , Divergence, and Mixed Origin Contribute to the Emergence of Orphan Genes in Pristionchus Nematodes

G3 : genes - genomes - genetics, 2019-07, Vol.9 (7), p.2277-2286

2019

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Only a Single Taxonomically Restricted Gene Family in the Drosophila melanogaster Subgroup Can Be Identified with High Confidence

Genome biology and evolution, 2020-08, Vol.12 (8), p.1355-1366

2020

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Long non-coding RNAs as a source of new peptides

eLife, 2014-09, Vol.3, p.e03523-e03523

2014

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Synteny-based analyses indicate that sequence divergence is not the main source of orphan genes

eLife, 2020-02, Vol.9

2020

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Evolutionary Trajectories of New Duplicated and Putative De Novo Genes

Molecular biology and evolution, 2023-05, Vol.40 (5)

2023

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Genes from scratch – the evolutionary fate of de novo genes

Trends in genetics, 2015-04, Vol.31 (4), p.215-219

Schlotterer, Christian

2015

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A Molecular Portrait of De Novo Genes in Yeasts

Molecular biology and evolution, 2018-03, Vol.35 (3), p.631-645

2018

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Spatial Transcriptomics of Nematodes Identifies Sperm Cells as a Source of Genomic Novelty and Rapid Evolution

Molecular biology and evolution, 2021-01, Vol.38 (1), p.229-243

2021

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Optimizing codon usage and gene evolution in the unicellular red alga Cyanidioschyzon merolae

Cytologia, 2024-09, Vol.89 (3), p.187-195, Article D-24-00048

2024

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A Continuum of Evolving De Novo Genes Drives Protein-Coding Novelty in Drosophila

Journal of molecular evolution, 2020-05, Vol.88 (4), p.382-398

2020

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Newly evolved genes in the human lineage are functional

Trends in genetics, 2023-04, Vol.39 (4), p.235-236

2023

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Testis single-cell RNA-seq reveals the dynamics of de novo gene transcription and germline mutational bias in Drosophila

eLife, 2019-08, Vol.8

2019

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Massively integrated coexpression analysis reveals transcriptional regulation, evolution and cellular implications of the yeast noncanonical translatome

Genome Biology, 2024-07, Vol.25 (1), p.183-28, Article 183

2024

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Neutral Models of De Novo Gene Emergence Suggest that Gene Evolution has a Preferred Trajectory

Molecular biology and evolution, 2023-04, Vol.40 (4)

2023

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De novo genes in Arachis hypogaea cv. Tifrunner: systematic identification, molecular evolution, and potential contributions to cultivated peanut

The Plant journal : for cell and molecular biology, 2022-08, Vol.111 (4), p.1081-1095

2022

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A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage

BMC genomics, 2024-09, Vol.25 (Suppl 3), p.834-10, Article 834

2024

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The Origins and Functions of De Novo Genes: Against All Odds?

Journal of molecular evolution, 2022-08, Vol.90 (3-4), p.244-257

Weisman, Caroline M.

2022

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Intergenic Regions of Saccharomycotina Yeasts are Enriched in Potential to Encode Transmembrane Domains

Molecular biology and evolution, 2023-03, Vol.40 (3)

2023

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Evolution of new proteins from translated sORFs in long non-coding RNAs

Experimental cell research, 2020-06, Vol.391 (1), p.111940-111940, Article 111940

2020

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A de novo gene originating from the mitochondria controls floral transition in Arabidopsis thaliana

Plant molecular biology, 2023-01, Vol.111 (1-2), p.189-203

2023

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New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2015-09, Vol.370 (1678), p.20140332

2015

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Molecular mechanism and history of non-sense to sense evolution of antifreeze glycoprotein gene in northern gadids

Proceedings of the National Academy of Sciences - PNAS, 2019-03, Vol.116 (10), p.4400-4405

2019

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Evolutionary origins and interactomes of human, young microproteins and small peptides translated from short open reading frames

Molecular cell, 2023-03, Vol.83 (6), p.994-1011.e18

2023

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New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos

Molecular biology and evolution, 2021-12, Vol.38 (12), p.5752-5768

2021

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The meanings of 'function' in biology and the problematic case of de novo gene emergence

eLife, 2019-11, Vol.8

2019

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De Novo , Divergence, and Mixed Origin Contribute to the Emergence of Orphan Genes in Pristionchus Nematodes

Only a Single Taxonomically Restricted Gene Family in the Drosophila melanogaster Subgroup Can Be Identified with High Confidence

Long non-coding RNAs as a source of new peptides

Synteny-based analyses indicate that sequence divergence is not the main source of orphan genes

Evolutionary Trajectories of New Duplicated and Putative De Novo Genes

Genes from scratch – the evolutionary fate of de novo genes

A Molecular Portrait of De Novo Genes in Yeasts

Spatial Transcriptomics of Nematodes Identifies Sperm Cells as a Source of Genomic Novelty and Rapid Evolution

Optimizing codon usage and gene evolution in the unicellular red alga Cyanidioschyzon merolae

A Continuum of Evolving De Novo Genes Drives Protein-Coding Novelty in Drosophila

Newly evolved genes in the human lineage are functional

Testis single-cell RNA-seq reveals the dynamics of de novo gene transcription and germline mutational bias in Drosophila

Massively integrated coexpression analysis reveals transcriptional regulation, evolution and cellular implications of the yeast noncanonical translatome

Neutral Models of De Novo Gene Emergence Suggest that Gene Evolution has a Preferred Trajectory

De novo genes in Arachis hypogaea cv. Tifrunner: systematic identification, molecular evolution, and potential contributions to cultivated peanut

A putative scenario of how de novo protein-coding genes originate in the Saccharomyces cerevisiae lineage

The Origins and Functions of De Novo Genes: Against All Odds?

Intergenic Regions of Saccharomycotina Yeasts are Enriched in Potential to Encode Transmembrane Domains

Evolution of new proteins from translated sORFs in long non-coding RNAs

A de novo gene originating from the mitochondria controls floral transition in Arabidopsis thaliana

New genes from non-coding sequence: the role of de novo protein-coding genes in eukaryotic evolutionary innovation

Molecular mechanism and history of non-sense to sense evolution of antifreeze glycoprotein gene in northern gadids

Evolutionary origins and interactomes of human, young microproteins and small peptides translated from short open reading frames

New Genes Interacted With Recent Whole-Genome Duplicates in the Fast Stem Growth of Bamboos

The meanings of 'function' in biology and the problematic case of de novo gene emergence

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