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Assembly of continuous high‐resolution draft genome sequence of Hemicentrotus pulcherrimus using long‐read sequencing

Development, growth & differentiation, 2024-05, Vol.66 (4), p.297-304

2024

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Guidelines for the nomenclature of genetic elements in tunicate genomes

Genesis (New York, N.Y. : 2000), 2015-01, Vol.53 (1), p.1-14

2015

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High-Resolution Epigenomic Atlas of Human Embryonic Craniofacial Development

Cell reports (Cambridge), 2018-05, Vol.23 (5), p.1581-1597

2018

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Using phenotypic plasticity to understand the structure and evolution of the genotype–phenotype map

Genetica, 2022-08, Vol.150 (3-4), p.209-221

2022

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Dosage compensation evolution in plants: theories, controversies and mechanisms

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2022-05, Vol.377 (1850), p.20210222

2022

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Evolutionary changes in cis and trans gene regulation

Nature, 2004-07, Vol.430 (6995), p.85-88

2004

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Temporal regulation of cold transcriptional response in switchgrass

Frontiers in plant science, 2022-10, Vol.13, p.998400-998400

2022

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Cell Cycle Kinase Polo Is Controlled by a Widespread 3′ Untranslated Region Regulatory Sequence in Drosophila melanogaster

Molecular and cellular biology, 2019-08, Vol.39 (15)

2019

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Structural and Comparative Analyses of Insects Suggest the Presence of an Ultra-Conserved Regulatory Element of the Genes Encoding Vacuolar-Type ATPase Subunits and Assembly Factors

Biology (Basel, Switzerland), 2023-08, Vol.12 (8), p.1127

2023

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Application of the iPLUS non-coding sequence in improving biopharmaceuticals production

Frontiers in bioengineering and biotechnology, 2024-02, Vol.12, p.1355957-1355957

2024

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Identification of plant transcription factor target sequences

Biochimica et biophysica acta. Gene regulatory mechanisms, 2017-01, Vol.1860 (1), p.21-30

2017

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The Functionality and Evolution of Eukaryotic Transcriptional Enhancers

Advances in genetics, 2016, Vol.96, p.143-206

2016

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Bioinformatic Identification of Conserved Cis-Sequences in Coregulated Genes

Methods in molecular biology (Clifton, N.J.), 2016-01, Vol.1482, p.233

2016

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Drosophila relics hobo and hobo-MITEs transposons as raw material for new regulatory networks

Genetics and molecular biology, 2018-01, Vol.41 (1 suppl 1), p.198-205

2018

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Evidence for a common evolutionary rate in metazoan transcriptional networks

eLife, 2015-12, Vol.4

2015

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In Silico Expression Analysis

Methods in molecular biology (Clifton, N.J.), 2016-01, Vol.1482, p.247

2016

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Exploring the effects of polymorphisms on cis -regulatory signal transduction response

Trends in molecular medicine, 2013-02, Vol.19 (2), p.99-107

2013

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Large-scale enhancer detection in the zebrafish genome

Development (Cambridge), 2005-09, Vol.132 (17), p.3799-3811

2005

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DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virus

BMC plant biology, 2012-08, Vol.12 (1), p.157-157

2012

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Genome-wide identification and transcriptional modulation of histone variants and modification related genes in the low pH-exposed marine rotifer Brachionus koreanus

Comparative biochemistry and physiology. Part D, Genomics & proteomics, 2020-12, Vol.36, p.100748, Article 100748

2020

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One for all

eLife, 2016-02, Vol.5

Odom, Duncan T

2016

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Spatially conserved regulatory elements identified within human and mouse Cd247 gene using high-throughput sequencing data from the ENCODE project

Gene, 2014-07, Vol.545 (1), p.80-87

2014

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Combinatorial control of temporal gene expression in the Drosophila wing by enhancers and core promoters

BMC genomics, 2012-09, Vol.13 (1), p.498-498, Article 498

2012

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Patchy Interspecific Sequence Similarities Efficiently Identify Positive cis-Regulatory Elements in the Sea Urchin

Developmental biology, 2002-06, Vol.246 (1), p.148-161

2002

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Tissue-specific expression of FoxD reporter constructs in amphioxus embryos

Developmental biology, 2004-10, Vol.274 (2), p.452-461

2004

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Assembly of continuous high‐resolution draft genome sequence of Hemicentrotus pulcherrimus using long‐read sequencing

Guidelines for the nomenclature of genetic elements in tunicate genomes

High-Resolution Epigenomic Atlas of Human Embryonic Craniofacial Development

Using phenotypic plasticity to understand the structure and evolution of the genotype–phenotype map

Dosage compensation evolution in plants: theories, controversies and mechanisms

Evolutionary changes in cis and trans gene regulation

Temporal regulation of cold transcriptional response in switchgrass

Cell Cycle Kinase Polo Is Controlled by a Widespread 3′ Untranslated Region Regulatory Sequence in Drosophila melanogaster

Structural and Comparative Analyses of Insects Suggest the Presence of an Ultra-Conserved Regulatory Element of the Genes Encoding Vacuolar-Type ATPase Subunits and Assembly Factors

Application of the iPLUS non-coding sequence in improving biopharmaceuticals production

Identification of plant transcription factor target sequences

The Functionality and Evolution of Eukaryotic Transcriptional Enhancers

Bioinformatic Identification of Conserved Cis-Sequences in Coregulated Genes

Drosophila relics hobo and hobo-MITEs transposons as raw material for new regulatory networks

Evidence for a common evolutionary rate in metazoan transcriptional networks

In Silico Expression Analysis

Exploring the effects of polymorphisms on cis -regulatory signal transduction response

Large-scale enhancer detection in the zebrafish genome

DNA binding specificity of ATAF2, a NAC domain transcription factor targeted for degradation by Tobacco mosaic virus

Genome-wide identification and transcriptional modulation of histone variants and modification related genes in the low pH-exposed marine rotifer Brachionus koreanus

One for all

Spatially conserved regulatory elements identified within human and mouse Cd247 gene using high-throughput sequencing data from the ENCODE project

Combinatorial control of temporal gene expression in the Drosophila wing by enhancers and core promoters

Patchy Interspecific Sequence Similarities Efficiently Identify Positive cis-Regulatory Elements in the Sea Urchin

Tissue-specific expression of FoxD reporter constructs in amphioxus embryos

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