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Protein and RNA dynamical fingerprinting

Nature communications, 2019-03, Vol.10 (1), p.1026-1026, Article 1026

2019

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Development of an LC-MS/MS peptide mapping protocol for the NISTmAb

Analytical and bioanalytical chemistry, 2018-03, Vol.410 (8), p.2111-2126

2018

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A systematic evaluation of normalization methods in quantitative label-free proteomics

Briefings in bioinformatics, 2018-01, Vol.19 (1), p.1-11

2018

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Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

Nature nanotechnology, 2014-06, Vol.9 (6), p.466-473

2014

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Addressing common challenges of biotherapeutic protein peptide mapping using recombinant trypsin

Journal of pharmaceutical and biomedical analysis, 2024-06, Vol.243, p.116124-116124, Article 116124

2024

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Optimized Multi-Attribute Method Workflow Addressing Missed Cleavages and Chromatographic Tailing/Carry-Over of Hydrophobic Peptides

Analytical chemistry (Washington), 2022-12, Vol.94 (49), p.17195-17204

2022

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LOV thy neighbor: Mapping protein interactomes by genetically encodable photoproximity labeling

Proceedings of the National Academy of Sciences - PNAS, 2023-05, Vol.120 (20), p.1

2023

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Algorithms and design strategies towards automated glycoproteomics analysis

Mass spectrometry reviews, 2017-07, Vol.36 (4), p.475-498

2017

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Analysis of monoclonal antibody by a novel CE-UV/MALDI-MS interface

Electrophoresis, 2014-10, Vol.35 (20), p.2986-2995

2014

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Optimized Reversed-Phase Liquid Chromatography/Mass Spectrometry Methods for Intact Protein Analysis and Peptide Mapping of Adeno-Associated Virus Proteins

Human gene therapy, 2021-12, Vol.32 (23-24), p.1501-1511

2021

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Practical solutions for overcoming artificial disulfide scrambling in the non-reduced peptide mapping characterization of monoclonal antibodies

mAbs, 2024-01, Vol.16 (1), p.2420805

2024

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Classification of quinoa varieties based on protein fingerprinting by capillary electrophoresis with ultraviolet absorption diode array detection and advanced chemometrics

Food chemistry, 2021-03, Vol.341 (Pt 1), p.128207-128207, Article 128207

2021

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A simplified non-reduced peptide mapping method with faster and efficient enzymatic digestion for characterization of native disulfide bonds in monoclonal and bispecific antibodies

Journal of pharmaceutical and biomedical analysis, 2024-11, Vol.250, p.116400, Article 116400

2024

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Orthogonal Comparison of Analytical Methods by Theoretical Reconstruction from Bottom-up Assay Data

Journal of the American Society for Mass Spectrometry, 2021-08, Vol.32 (8), p.2013-2018

2021

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Inter-laboratory study of an optimised peptide mapping workflow using automated trypsin digestion for monitoring monoclonal antibody product quality attributes

Analytical and bioanalytical chemistry, 2020-10, Vol.412 (25), p.6833-6848

2020

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Development of a rapid RP-UHPLC–MS method for analysis of modifications in therapeutic monoclonal antibodies

Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2016-10, Vol.1032, p.172-181

2016

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Characterization of antibody drug conjugate positional isomers at cysteine residues by peptide mapping LC–MS analysis

Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2015-02, Vol.981-982, p.9-13

2015

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Peptide location fingerprinting reveals modification‐associated biomarker candidates of ageing in human tissue proteomes

Aging cell, 2021-05, Vol.20 (5), p.e13355-n/a

2021

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Development, validation, and implementation of a robust and quality control-friendly focused peptide mapping method for monitoring oxidation of co-formulated monoclonal antibodies

Analytical and bioanalytical chemistry, 2022-12, Vol.414 (29-30), p.8317-8330

2022

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The C‑Score: A Bayesian Framework to Sharply Improve Proteoform Scoring in High-Throughput Top Down Proteomics

Journal of proteome research, 2014-07, Vol.13 (7), p.3231-3240

2014

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MALDI-TOF mass spectrometry on intact bacteria combined with a refined analysis framework allows accurate classification of MSSA and MRSA

PloS one, 2019-06, Vol.14 (6), p.e0218951-e0218951

2019

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Development of an efficient LC-MS peptide mapping method using accelerated sample preparation for monoclonal antibodies

Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2020-01, Vol.1137, p.121895-121895, Article 121895

2020

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Streamlining Peptide Mapping LC-MS Approach for Studying Fusion Peptide-Conjugated Vaccine Immunogens

Journal of the American Society for Mass Spectrometry, 2021-12, Vol.32 (12), p.2777-2790

2021

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Vaccination with ADCC activating HA peptide epitopes provides partial protection from influenza infection

Vaccine, 2020-08, Vol.38 (37), p.5885-5890

2020

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Comprehensive Peptide Mapping Is Crucial for Proteogenomics and Proteomics

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2859, p.39

Allmer, Jens

2025

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Protein and RNA dynamical fingerprinting

Development of an LC-MS/MS peptide mapping protocol for the NISTmAb

A systematic evaluation of normalization methods in quantitative label-free proteomics

Single-molecule spectroscopy of amino acids and peptides by recognition tunnelling

Addressing common challenges of biotherapeutic protein peptide mapping using recombinant trypsin

Optimized Multi-Attribute Method Workflow Addressing Missed Cleavages and Chromatographic Tailing/Carry-Over of Hydrophobic Peptides

LOV thy neighbor: Mapping protein interactomes by genetically encodable photoproximity labeling

Algorithms and design strategies towards automated glycoproteomics analysis

Analysis of monoclonal antibody by a novel CE-UV/MALDI-MS interface

Optimized Reversed-Phase Liquid Chromatography/Mass Spectrometry Methods for Intact Protein Analysis and Peptide Mapping of Adeno-Associated Virus Proteins

Practical solutions for overcoming artificial disulfide scrambling in the non-reduced peptide mapping characterization of monoclonal antibodies

Classification of quinoa varieties based on protein fingerprinting by capillary electrophoresis with ultraviolet absorption diode array detection and advanced chemometrics

A simplified non-reduced peptide mapping method with faster and efficient enzymatic digestion for characterization of native disulfide bonds in monoclonal and bispecific antibodies

Orthogonal Comparison of Analytical Methods by Theoretical Reconstruction from Bottom-up Assay Data

Inter-laboratory study of an optimised peptide mapping workflow using automated trypsin digestion for monitoring monoclonal antibody product quality attributes

Development of a rapid RP-UHPLC–MS method for analysis of modifications in therapeutic monoclonal antibodies

Characterization of antibody drug conjugate positional isomers at cysteine residues by peptide mapping LC–MS analysis

Peptide location fingerprinting reveals modification‐associated biomarker candidates of ageing in human tissue proteomes

Development, validation, and implementation of a robust and quality control-friendly focused peptide mapping method for monitoring oxidation of co-formulated monoclonal antibodies

The C‑Score: A Bayesian Framework to Sharply Improve Proteoform Scoring in High-Throughput Top Down Proteomics

MALDI-TOF mass spectrometry on intact bacteria combined with a refined analysis framework allows accurate classification of MSSA and MRSA

Development of an efficient LC-MS peptide mapping method using accelerated sample preparation for monoclonal antibodies

Streamlining Peptide Mapping LC-MS Approach for Studying Fusion Peptide-Conjugated Vaccine Immunogens

Vaccination with ADCC activating HA peptide epitopes provides partial protection from influenza infection

Comprehensive Peptide Mapping Is Crucial for Proteogenomics and Proteomics

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