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Molecular Modeling in Drug Design

2019

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A2A and A2B adenosine receptors: The extracellular loop 2 determines high (A2A) or low affinity (A2B) for adenosine

Biochemical pharmacology, 2020-02, Vol.172, p.113718-113718, Article 113718

2020

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Human organic anion transporting polypeptide 1B3 (OATP1B3) is more heavily N-glycosylated than OATP1B1 in extracellular loops 2 and 5

International journal of biological macromolecules, 2024-10, Vol.278 (Pt 2), p.134748, Article 134748

2024

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A monoclonal antibody raised against a thermo-stabilised β1-adrenoceptor interacts with extracellular loop 2 and acts as a negative allosteric modulator of a sub-set of β1-adrenoceptors expressed in stable cell lines

Biochemical pharmacology, 2018-01, Vol.147, p.38-54

2018

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Clostridium perfringens enterotoxin binds to the second extracellular loop of claudin-3, a tight junction integral membrane protein

FEBS letters, 2000-07, Vol.476 (3), p.258-261

2000

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Mechanical plasticity during oligodendrocyte differentiation and myelination

Glia, 2018-01, Vol.66 (1), p.5-14

2018

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The extracellular loop of the auxiliary β1-subunit is involved in the regulation of BKCa channel mechanosensitivity

American Journal of Physiology: Cell Physiology, 2018-10, Vol.315 (4), p.C485-C493

2018

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Monitoring Allosteric Interactions with CXCR4 Using NanoBiT Conjugated Nanobodies

Cell chemical biology, 2020-10, Vol.27 (10), p.1250-1261.e5

2020

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A Novel FadL Homolog, AltL, Mediates Transport of Long-Chain Alkanes and Fatty Acids in Acinetobacter venetianus RAG-1

Applied and environmental microbiology, 2022-10, Vol.88 (20), p.e0129422

2022

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Cation Diffusion Facilitator family: Structure and function

FEBS letters, 2015-05, Vol.589 (12), p.1283-1295

2015

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Lifting the lid on GPCRs: the role of extracellular loops

British journal of pharmacology, 2012-03, Vol.165 (6), p.1688-1703

2012

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Plasticity of the ligand binding pocket in the bitter taste receptor T2R7

Biochimica et biophysica acta. Biomembranes, 2018-05, Vol.1860 (5), p.991-999

2018

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Rational Design and Evaluation of an Artificial Escherichia coli K1 Protein Vaccine Candidate Based on the Structure of OmpA

Frontiers in cellular and infection microbiology, 2018-05, Vol.8, p.172-172

2018

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Extracellular Cysteines Are Critical to Form Functional Cx46 Hemichannels

International journal of molecular sciences, 2022-06, Vol.23 (13), p.7252

2022

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The Cryo-EM structure of pannexin 1 reveals unique motifs for ion selection and inhibition

eLife, 2020-02, Vol.9

2020

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Novel molecular mechanisms for Prph2‐associated pattern dystrophy

The FASEB journal, 2020-01, Vol.34 (1), p.1211-1230

2020

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Molecular mechanism of Aquaporin 0-induced fiber cell to fiber cell adhesion in the eye lens

Biochemical and biophysical research communications, 2018-11, Vol.506 (1), p.284-289

2018

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Structure and function of claudins

Biochimica et biophysica acta, 2008-03, Vol.1778 (3), p.631-645

2008

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Chemometric Models of Differential Amino Acids at the Navα and Navβ Interface of Mammalian Sodium Channel Isoforms

Molecules (Basel, Switzerland), 2020-08, Vol.25 (15), p.3551

2020

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Protein Analyte Sensing with an Outer Membrane Protein G (OmpG) Nanopore

Methods in molecular biology (Clifton, N.J.), 2021, Vol.2186, p.77

2021

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Understanding the common themes and diverse roles of the second extracellular loop (ECL2) of the GPCR super-family

Molecular and cellular endocrinology, 2017-07, Vol.449, p.3-11

2017

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Structure and closure of connexin gap junction channels

FEBS letters, 2014-04, Vol.588 (8), p.1230-1237

Oshima, Atsunori

2014

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Receptor Activity-modifying Proteins 2 and 3 Generate Adrenomedullin Receptor Subtypes with Distinct Molecular Properties

The Journal of biological chemistry, 2016-05, Vol.291 (22), p.11657-11675

2016

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G protein-coupled receptors: the evolution of structural insight

AIMS biophysics, 2017-01, Vol.4 (3), p.491-527

2017

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The interaction between claudin-1 and dengue viral prM/M protein for its entry

Virology (New York, N.Y.), 2013-11, Vol.446 (1), p.303-313

2013

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Molecular Modeling in Drug Design

A2A and A2B adenosine receptors: The extracellular loop 2 determines high (A2A) or low affinity (A2B) for adenosine

Human organic anion transporting polypeptide 1B3 (OATP1B3) is more heavily N-glycosylated than OATP1B1 in extracellular loops 2 and 5

A monoclonal antibody raised against a thermo-stabilised β1-adrenoceptor interacts with extracellular loop 2 and acts as a negative allosteric modulator of a sub-set of β1-adrenoceptors expressed in stable cell lines

Clostridium perfringens enterotoxin binds to the second extracellular loop of claudin-3, a tight junction integral membrane protein

Mechanical plasticity during oligodendrocyte differentiation and myelination

The extracellular loop of the auxiliary β1-subunit is involved in the regulation of BKCa channel mechanosensitivity

Monitoring Allosteric Interactions with CXCR4 Using NanoBiT Conjugated Nanobodies

A Novel FadL Homolog, AltL, Mediates Transport of Long-Chain Alkanes and Fatty Acids in Acinetobacter venetianus RAG-1

Cation Diffusion Facilitator family: Structure and function

Lifting the lid on GPCRs: the role of extracellular loops

Plasticity of the ligand binding pocket in the bitter taste receptor T2R7

Rational Design and Evaluation of an Artificial Escherichia coli K1 Protein Vaccine Candidate Based on the Structure of OmpA

Extracellular Cysteines Are Critical to Form Functional Cx46 Hemichannels

The Cryo-EM structure of pannexin 1 reveals unique motifs for ion selection and inhibition

Novel molecular mechanisms for Prph2‐associated pattern dystrophy

Molecular mechanism of Aquaporin 0-induced fiber cell to fiber cell adhesion in the eye lens

Structure and function of claudins

Chemometric Models of Differential Amino Acids at the Navα and Navβ Interface of Mammalian Sodium Channel Isoforms

Protein Analyte Sensing with an Outer Membrane Protein G (OmpG) Nanopore

Understanding the common themes and diverse roles of the second extracellular loop (ECL2) of the GPCR super-family

Structure and closure of connexin gap junction channels

Receptor Activity-modifying Proteins 2 and 3 Generate Adrenomedullin Receptor Subtypes with Distinct Molecular Properties

G protein-coupled receptors: the evolution of structural insight

The interaction between claudin-1 and dengue viral prM/M protein for its entry

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