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Fast and inexpensive protocols for consistent extraction of high quality DNA and RNA from challenging plant and fungal samples for high-throughput SNP genotyping and sequencing applications

PloS one, 2018-10, Vol.13 (10), p.e0206085-e0206085

2018

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Abundance and Diversity of Bacterial, Archaeal, and Fungal Communities Along an Altitudinal Gradient in Alpine Forest Soils: What Are the Driving Factors?

Microbial ecology, 2016-07, Vol.72 (1), p.207-220

2016

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Effects of fortification of Daqu with various yeasts on microbial community structure and flavor metabolism

Food research international, 2020-03, Vol.129, p.108837, Article 108837

2020

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A revised family-level classification of the Polyporales (Basidiomycota)

Fungal biology, 2017-09, Vol.121 (9), p.798-824

2017

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Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

PloS one, 2016-10, Vol.11 (10), p.e0164533-e0164533

2016

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Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

Genome research, 2015-11, Vol.25 (11), p.1750-1756

2015

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Extrachromosomal circular DNA is common in yeast

Proceedings of the National Academy of Sciences - PNAS, 2015-06, Vol.112 (24), p.E3114-E3122

2015

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Soil Microbial Community Responses to Multiple Experimental Climate Change Drivers

Applied and Environmental Microbiology, 2010-02, Vol.76 (4), p.999-1007

2010

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Discovery of fungal oligosaccharide-oxidising flavo-enzymes with previously unknown substrates, redox-activity profiles and interplay with LPMOs

Nature communications, 2021-04, Vol.12 (1), p.2132-2132, Article 2132

2021

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Soil microbiome transfer method affects microbiome composition, including dominant microorganisms, in a novel environment

FEMS microbiology letters, 2017-06, Vol.364 (11)

2017

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Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

FEMS microbiology ecology, 2012-06, Vol.80 (3), p.735-746

2012

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Sequence depth, not PCR replication, improves ecological inference from next generation DNA sequencing

PloS one, 2014-02, Vol.9 (2), p.e90234-e90234

2014

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Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients

Journal of Crohn's and colitis, 2016-03, Vol.10 (3), p.296-305

2016

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High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing

PloS one, 2021-07, Vol.16 (7), p.e0253830

2021

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Filling gaps in biodiversity knowledge for macrofungi: contributions and assessment of an herbarium collection DNA barcode sequencing project

PloS one, 2013-04, Vol.8 (4), p.e62419-e62419

2013

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Highly purified DNA-containing cell envelopes from fungi for direct use in PCR

Analytica chimica acta, 2023-09, Vol.1273, p.341528-341528, Article 341528

2023

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Whole Genome Comparison Reveals High Levels of Inbreeding and Strain Redundancy Across the Spectrum of Commercial Wine Strains of Saccharomyces cerevisiae

G3 : genes - genomes - genetics, 2016-04, Vol.6 (4), p.957-971

2016

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Characterization of the oral fungal microbiome (mycobiome) in healthy individuals

PLoS pathogens, 2010-01, Vol.6 (1), p.e1000713

2010

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Characterization of Bacterial and Fungal Microbiome in Children with Hirschsprung Disease with and without a History of Enterocolitis: A Multicenter Study

PloS one, 2015-04, Vol.10 (4), p.e0124172-e0124172

2015

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Deoxynivalenol and other selected Fusarium toxins in Swedish wheat — Occurrence and correlation to specific Fusarium species

International journal of food microbiology, 2013-10, Vol.167 (2), p.284-291

2013

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Multicenter comparative study of Enterocytozoon bieneusi DNA extraction methods from stool samples, and mechanical pretreatment protocols evaluation

Scientific reports, 2024-07, Vol.14 (1), p.15404-9, Article 15404

2024

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Deoxynivalenol and other selected Fusarium toxins in Swedish oats — Occurrence and correlation to specific Fusarium species

International journal of food microbiology, 2013-10, Vol.167 (2), p.276-283

2013

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Evaluating the Impact of DNA Extraction Method on the Representation of Human Oral Bacterial and Fungal Communities

PloS one, 2017-01, Vol.12 (1), p.e0169877-e0169877

2017

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Outcome of Colonization of Apis mellifera by Nosema ceranae

Applied and Environmental Microbiology, 2007-10, Vol.73 (20), p.6331-6338

2007

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Fungal diversity and natural occurrence of deoxynivalenol and zearalenone in freshly harvested wheat grains from Brazil

Food chemistry, 2016-04, Vol.196, p.445-450

2016

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Fast and inexpensive protocols for consistent extraction of high quality DNA and RNA from challenging plant and fungal samples for high-throughput SNP genotyping and sequencing applications

Abundance and Diversity of Bacterial, Archaeal, and Fungal Communities Along an Altitudinal Gradient in Alpine Forest Soils: What Are the Driving Factors?

Effects of fortification of Daqu with various yeasts on microbial community structure and flavor metabolism

A revised family-level classification of the Polyporales (Basidiomycota)

Microbiome and Exudates of the Root and Rhizosphere of Brachypodium distachyon, a Model for Wheat

Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

Extrachromosomal circular DNA is common in yeast

Soil Microbial Community Responses to Multiple Experimental Climate Change Drivers

Discovery of fungal oligosaccharide-oxidising flavo-enzymes with previously unknown substrates, redox-activity profiles and interplay with LPMOs

Soil microbiome transfer method affects microbiome composition, including dominant microorganisms, in a novel environment

Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers

Sequence depth, not PCR replication, improves ecological inference from next generation DNA sequencing

Fungal Dysbiosis in Mucosa-associated Microbiota of Crohn’s Disease Patients

High-molecular weight DNA extraction, clean-up and size selection for long-read sequencing

Filling gaps in biodiversity knowledge for macrofungi: contributions and assessment of an herbarium collection DNA barcode sequencing project

Highly purified DNA-containing cell envelopes from fungi for direct use in PCR

Whole Genome Comparison Reveals High Levels of Inbreeding and Strain Redundancy Across the Spectrum of Commercial Wine Strains of Saccharomyces cerevisiae

Characterization of the oral fungal microbiome (mycobiome) in healthy individuals

Characterization of Bacterial and Fungal Microbiome in Children with Hirschsprung Disease with and without a History of Enterocolitis: A Multicenter Study

Deoxynivalenol and other selected Fusarium toxins in Swedish wheat — Occurrence and correlation to specific Fusarium species

Multicenter comparative study of Enterocytozoon bieneusi DNA extraction methods from stool samples, and mechanical pretreatment protocols evaluation

Deoxynivalenol and other selected Fusarium toxins in Swedish oats — Occurrence and correlation to specific Fusarium species

Evaluating the Impact of DNA Extraction Method on the Representation of Human Oral Bacterial and Fungal Communities

Outcome of Colonization of Apis mellifera by Nosema ceranae

Fungal diversity and natural occurrence of deoxynivalenol and zearalenone in freshly harvested wheat grains from Brazil

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