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A cancer drug atlas enables synergistic targeting of independent drug vulnerabilities

Nature communications, 2020-06, Vol.11 (1), p.2935-14, Article 2935

2020

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CGHcall: calling aberrations for array CGH tumor profiles

Bioinformatics, 2007-04, Vol.23 (7), p.892-894

2007

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Identification of Deregulated Pathways, Key Regulators, and Novel miRNA-mRNA Interactions in HPV-Mediated Transformation

Cancers, 2020-03, Vol.12 (3), p.700

2020

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A parallel algorithm for ridge-penalized estimation of the multivariate exponential family from data of mixed types

Statistics and computing, 2021-07, Vol.31 (4), Article 41

2021

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4H Leukodystrophy: A Brain Magnetic Resonance Imaging Scoring System

Neuropediatrics, 2017-06, Vol.48 (3), p.152

2017

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Sequential Learning of Regression Models by Penalized Estimation

Journal of computational and graphical statistics, 2022-07, Vol.31 (3), p.877-886

2022

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Penalized estimation of the Gaussian graphical model from data with replicates

Statistics in medicine, 2021-08, Vol.40 (19), p.4279-4293

2021

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Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

BMC bioinformatics, 2018-08, Vol.19 (1), p.301-301, Article 301

2018

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The Generalized Ridge Estimator of the Inverse Covariance Matrix

Journal of computational and graphical statistics, 2019-10, Vol.28 (4), p.932-942

van Wieringen, Wessel N.

2019

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A test for detecting differential indirect trans effects between two groups of samples

Statistical applications in genetics and molecular biology, 2018-07, Vol.17 (5)

2018

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Better prediction by use of co-data: adaptive group-regularized ridge regression

Statistics in medicine, 2016-02, Vol.35 (3), p.368-381

2016

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Two-dimensional fused targeted ridge regression for health indicator prediction from accelerometer data

Journal of the Royal Statistical Society Series C: Applied Statistics, 2023-09, Vol.72 (4), p.1064-1078

2023

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Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses

BMC bioinformatics, 2012-05, Vol.13 (1), p.80-80, Article 80

2012

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Analysis of Twitter data with the Bayesian fused graphical lasso

PloS one, 2020-07, Vol.15 (7), p.e0235596-e0235596

2020

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Impaired Awareness in People with Severe Alcohol-Related Cognitive Deficits Including Korskoff's Syndrome: A Network Analysis

Journal of clinical medicine, 2023-04, Vol.12 (9), p.3139

2023

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A test for comparing two groups of samples when analyzing multiple omics profiles

BMC bioinformatics, 2014-07, Vol.15 (1), p.236-236, Article 236

2014

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Nonparametric Testing for DNA Copy Number Induced Differential mRNA Gene Expression

Biometrics, 2009-03, Vol.65 (1), p.19-29

2009

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CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss

Cancer informatics, 2007-01, Vol.3, p.55-63

2007

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tigaR: integrative significance analysis of temporal differential gene expression induced by genomic abnormalities

BMC bioinformatics, 2014-10, Vol.15 (1), p.327-327, Article 327

2014

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Magnetic resonance imaging pattern recognition in hypomyelinating disorders

Brain (London, England : 1878), 2010-10, Vol.133 (10), p.2971-2982

2010

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Genomic profiling identifies common HPV-associated chromosomal alterations in squamous cell carcinomas of cervix and head and neck

BMC medical genomics, 2009-06, Vol.2 (1), p.32-32, Article 32

2009

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HPV type-related chromosomal profiles in high-grade cervical intraepithelial neoplasia

BMC cancer, 2012-01, Vol.12 (1), p.36-36, Article 36

2012

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No Plasmatic Proteomic Signature at Clinical Disease Onset Associated With 11 Year Clinical, Cognitive and MRI Outcomes in Relapsing-Remitting Multiple Sclerosis Patients

Frontiers in molecular neuroscience, 2018-10, Vol.11, p.371-371

2018

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Mechanical stress regulates bone regulatory gene expression independent of estrogen and vitamin D deficiency in rats

Journal of orthopaedic research, 2021-01, Vol.39 (1), p.42-52

2021

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Modeling and Evaluating Repeatability and Reproducibility of Ordinal Classifications

Technometrics, 2010-02, Vol.52 (1), p.94-106

2010

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A cancer drug atlas enables synergistic targeting of independent drug vulnerabilities

CGHcall: calling aberrations for array CGH tumor profiles

Identification of Deregulated Pathways, Key Regulators, and Novel miRNA-mRNA Interactions in HPV-Mediated Transformation

A parallel algorithm for ridge-penalized estimation of the multivariate exponential family from data of mixed types

4H Leukodystrophy: A Brain Magnetic Resonance Imaging Scoring System

Sequential Learning of Regression Models by Penalized Estimation

Penalized estimation of the Gaussian graphical model from data with replicates

Rscreenorm: normalization of CRISPR and siRNA screen data for more reproducible hit selection

The Generalized Ridge Estimator of the Inverse Covariance Matrix

A test for detecting differential indirect trans effects between two groups of samples

Better prediction by use of co-data: adaptive group-regularized ridge regression

Two-dimensional fused targeted ridge regression for health indicator prediction from accelerometer data

Matching of array CGH and gene expression microarray features for the purpose of integrative genomic analyses

Analysis of Twitter data with the Bayesian fused graphical lasso

Impaired Awareness in People with Severe Alcohol-Related Cognitive Deficits Including Korskoff's Syndrome: A Network Analysis

A test for comparing two groups of samples when analyzing multiple omics profiles

Nonparametric Testing for DNA Copy Number Induced Differential mRNA Gene Expression

CGHregions: Dimension Reduction for Array CGH Data with Minimal Information Loss

tigaR: integrative significance analysis of temporal differential gene expression induced by genomic abnormalities

Magnetic resonance imaging pattern recognition in hypomyelinating disorders

Genomic profiling identifies common HPV-associated chromosomal alterations in squamous cell carcinomas of cervix and head and neck

HPV type-related chromosomal profiles in high-grade cervical intraepithelial neoplasia

No Plasmatic Proteomic Signature at Clinical Disease Onset Associated With 11 Year Clinical, Cognitive and MRI Outcomes in Relapsing-Remitting Multiple Sclerosis Patients

Mechanical stress regulates bone regulatory gene expression independent of estrogen and vitamin D deficiency in rats

Modeling and Evaluating Repeatability and Reproducibility of Ordinal Classifications

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