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A dictionary to identify small molecules and drugs in free text

Bioinformatics, 2009-11, Vol.25 (22), p.2983-2991

2009

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QTLTableMiner ++ : semantic mining of QTL tables in scientific articles

BMC bioinformatics, 2018-05, Vol.19 (1), p.183-183, Article 183

2018

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Identifying genes targeted by disease-associated non-coding SNPs with a protein knowledge graph

PloS one, 2022-07, Vol.17 (7), p.e0271395-e0271395

2022

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Drug prioritization using the semantic properties of a knowledge graph

Scientific reports, 2019-04, Vol.9 (1), p.6281-6281, Article 6281

2019

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Parasitic infections related to anti-type 2 immunity monoclonal antibodies: a disproportionality analysis in the food and drug administration’s adverse event reporting system (FAERS)

Frontiers in pharmacology, 2023-11, Vol.14, p.1276340-1276340

2023

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Training text chunkers on a silver standard corpus: can silver replace gold?

BMC bioinformatics, 2012-01, Vol.13 (1), p.17-17, Article 17

2012

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Alignment of vaccine codes using an ontology of vaccine descriptions

Journal of biomedical semantics, 2022-10, Vol.13 (1), p.1-24, Article 24

2022

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Interoperability and FAIRness through a novel combination of Web technologies

PeerJ. Computer science, 2017-04, Vol.3, p.e110, Article e110

2017

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Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining

Journal of cheminformatics, 2010-03, Vol.2 (1), p.3-3, Article 3

2010

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The EU-ADR Web Platform: delivering advanced pharmacovigilance tools

Pharmacoepidemiology and drug safety, 2013-05, Vol.22 (5), p.459-467

2013

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Using predicate and provenance information from a knowledge graph for drug efficacy screening

Journal of biomedical semantics, 2018-09, Vol.9 (1), p.23-23, Article 23

2018

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Identifying disease trajectories with predicate information from a knowledge graph

Journal of biomedical semantics, 2020-08, Vol.11 (1), p.9-11, Article 9

2020

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Using rule-based natural language processing to improve disease normalization in biomedical text

Journal of the American Medical Informatics Association : JAMIA, 2013-09, Vol.20 (5), p.876-881

2013

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Annotation-preserving machine translation of English corpora to validate Dutch clinical concept extraction tools

Journal of the American Medical Informatics Association : JAMIA, 2024-08, Vol.31 (8), p.1725-1734

2024

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The added value of text from Dutch general practitioner notes in predictive modeling

Journal of the American Medical Informatics Association : JAMIA, 2023-11, Vol.30 (12), p.1973-1984

2023

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Knowledge-based extraction of adverse drug events from biomedical text

BMC bioinformatics, 2014-03, Vol.15 (1), p.64-64, Article 64

2014

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Novel protein-protein interactions inferred from literature context

PloS one, 2009-11, Vol.4 (11), p.e7894-e7894

2009

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Disproportionality Analysis and Characterisation of Medication Errors in EudraVigilance: Exploring Findings on Sexes and Age Groups

Drug safety, 2024-09

2024

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A novel feature-based approach to extract drug-drug interactions from biomedical text

Bioinformatics, 2014-12, Vol.30 (23), p.3365-3371

2014

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Use of unstructured text in prognostic clinical prediction models: a systematic review

Journal of the American Medical Informatics Association : JAMIA, 2022-06, Vol.29 (7), p.1292-1302

2022

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Using clinical text to refine unspecific condition codes in Dutch general practitioner EHR data

International journal of medical informatics (Shannon, Ireland), 2024-09, Vol.189, p.105506, Article 105506

2024

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Descriptive analysis on disproportionate medication errors and associated patient characteristics in the Food and Drug Administration's Adverse Event Reporting System

Pharmacoepidemiology and drug safety, 2024-01, Vol.33 (1), p.e5743-n/a

2024

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The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships

Journal of biomedical informatics, 2012-10, Vol.45 (5), p.879-884

2012

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A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC

Journal of the American Medical Informatics Association : JAMIA, 2015-09, Vol.22 (5), p.948-956

2015

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Evaluating Social Media Networks in Medicines Safety Surveillance: Two Case Studies

Drug safety, 2015-10, Vol.38 (10), p.921-930

2015

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A dictionary to identify small molecules and drugs in free text

QTLTableMiner ++ : semantic mining of QTL tables in scientific articles

Identifying genes targeted by disease-associated non-coding SNPs with a protein knowledge graph

Drug prioritization using the semantic properties of a knowledge graph

Parasitic infections related to anti-type 2 immunity monoclonal antibodies: a disproportionality analysis in the food and drug administration’s adverse event reporting system (FAERS)

Training text chunkers on a silver standard corpus: can silver replace gold?

Alignment of vaccine codes using an ontology of vaccine descriptions

Interoperability and FAIRness through a novel combination of Web technologies

Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining

The EU-ADR Web Platform: delivering advanced pharmacovigilance tools

Using predicate and provenance information from a knowledge graph for drug efficacy screening

Identifying disease trajectories with predicate information from a knowledge graph

Using rule-based natural language processing to improve disease normalization in biomedical text

Annotation-preserving machine translation of English corpora to validate Dutch clinical concept extraction tools

The added value of text from Dutch general practitioner notes in predictive modeling

Knowledge-based extraction of adverse drug events from biomedical text

Novel protein-protein interactions inferred from literature context

Disproportionality Analysis and Characterisation of Medication Errors in EudraVigilance: Exploring Findings on Sexes and Age Groups

A novel feature-based approach to extract drug-drug interactions from biomedical text

Use of unstructured text in prognostic clinical prediction models: a systematic review

Using clinical text to refine unspecific condition codes in Dutch general practitioner EHR data

Descriptive analysis on disproportionate medication errors and associated patient characteristics in the Food and Drug Administration's Adverse Event Reporting System

The EU-ADR corpus: Annotated drugs, diseases, targets, and their relationships

A multilingual gold-standard corpus for biomedical concept recognition: the Mantra GSC

Evaluating Social Media Networks in Medicines Safety Surveillance: Two Case Studies

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