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Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis

Nature communications, 2020-12, Vol.11 (1), p.6272-6272, Article 6272

2020

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Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing

Scientific reports, 2021-02, Vol.11 (1), p.3934-3934, Article 3934

2021

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Consensus guidelines for the diagnosis and management of invasive aspergillosis, 2021

Internal medicine journal, 2021-11, Vol.51 (S7), p.143-176

2021

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Systematic Review and Meta-Analysis of the Significance of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Isolates

Antimicrobial Agents and Chemotherapy, 2011-01, Vol.55 (1), p.405-410

2011

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Utility of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry following Introduction for Routine Laboratory Bacterial Identification

Journal of Clinical Microbiology, 2011-08, Vol.49 (8), p.2980-2984

2011

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Cronobacter sakazakii Infection from Expressed Breast Milk, Australia

Emerging infectious diseases, 2018-02, Vol.24 (2), p.393-394

2018

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Bayesian Forecasting for Intravenous Tobramycin Dosing in Adults With Cystic Fibrosis Using One Versus Two Serum Concentrations in a Dosing Interval

Therapeutic drug monitoring, 2021-08, Vol.43 (4), p.505

2021

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Vancomycin heteroresistance is associated with reduced mortality in ST239 methicillin-resistant Staphylococcus aureus blood stream infections

PloS one, 2011-06, Vol.6 (6), p.e21217-e21217

2011

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The global dissemination of hospital clones of Enterococcus faecium

Genome medicine, 2021-03, Vol.13 (1), p.52-12, Article 52

2021

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Recommendations To Address the Difficulties Encountered When Determining Linezolid Resistance from Whole-Genome Sequencing Data

Antimicrobial agents and chemotherapy, 2018-08, Vol.62 (8)

2018

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Centralised or Localised Pathogen Whole Genome Sequencing: Lessons Learnt From Implementation in a Clinical Diagnostic Laboratory

Frontiers in cellular and infection microbiology, 2021-05, Vol.11, p.636290-636290

2021

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Whole genome sequence analysis of the first Australian OXA-48-producing outbreak-associated Klebsiella pneumoniae isolates: the resistome and in vivo evolution

PloS one, 2013-03, Vol.8 (3), p.e59920-e59920

2013

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Relentless spread and adaptation of non-typeable vanA vancomycin-resistant Enterococcus faecium: a genome-wide investigation

Journal of antimicrobial chemotherapy, 2018-06, Vol.73 (6), p.1487-1491

2018

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Morbidity from in-hospital complications is greater than treatment failure in patients with Staphylococcus aureus bacteraemia

BMC infectious diseases, 2018-03, Vol.18 (1), p.107-107, Article 107

2018

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Persistence of a Frameshifting Deletion in SARS-CoV-2 ORF7a for the Duration of a Major Outbreak

Viruses, 2023-02, Vol.15 (2), p.522

2023

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Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus

mBio, 2015-03, Vol.6 (2), p.e00080-e00080

2015

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Global Scale Dissemination of ST93: A Divergent Staphylococcus aureus Epidemic Lineage That Has Recently Emerged From Remote Northern Australia

Frontiers in microbiology, 2018-07, Vol.9, p.1453

2018

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Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia

Viruses, 2022-01, Vol.14 (2), p.185

2022

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When sepsis persists: a review of MRSA bacteraemia salvage therapy

Journal of antimicrobial chemotherapy, 2016-03, Vol.71 (3), p.576-586

2016

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Clinical experience with new formulation SUBA®-itraconazole for prophylaxis in patients undergoing stem cell transplantation or treatment for haematological malignancies

Journal of antimicrobial chemotherapy, 2019-10, Vol.74 (10), p.3049-3055

2019

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Whole Genome Sequencing Shows Genetic Diversity, as Well as Clonal Complex and Gene Polymorphisms Associated with Fluconazole Non-Susceptible Isolates of Candida tropicalis

Journal of fungi (Basel), 2022-08, Vol.8 (9), p.896

2022

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The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

The Lancet. Microbe, 2022-02, Vol.3 (2), p.e133-e141

2022

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Evaluation of the Alfred 60/AST Device as a Screening Test for Urinary Tract Infections

Journal of Clinical Microbiology, 2013-10, Vol.51 (10), p.3406-3408

2013

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Pathophysiological Response to SARS-CoV-2 Infection Detected by Infrared Spectroscopy Enables Rapid and Robust Saliva Screening for COVID-19

Biomedicines, 2022-02, Vol.10 (2), p.351

2022

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Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis

Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing

Consensus guidelines for the diagnosis and management of invasive aspergillosis, 2021

Systematic Review and Meta-Analysis of the Significance of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Isolates

Utility of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry following Introduction for Routine Laboratory Bacterial Identification

Cronobacter sakazakii Infection from Expressed Breast Milk, Australia

Bayesian Forecasting for Intravenous Tobramycin Dosing in Adults With Cystic Fibrosis Using One Versus Two Serum Concentrations in a Dosing Interval

Vancomycin heteroresistance is associated with reduced mortality in ST239 methicillin-resistant Staphylococcus aureus blood stream infections

The global dissemination of hospital clones of Enterococcus faecium

Recommendations To Address the Difficulties Encountered When Determining Linezolid Resistance from Whole-Genome Sequencing Data

Centralised or Localised Pathogen Whole Genome Sequencing: Lessons Learnt From Implementation in a Clinical Diagnostic Laboratory

Whole genome sequence analysis of the first Australian OXA-48-producing outbreak-associated Klebsiella pneumoniae isolates: the resistome and in vivo evolution

Relentless spread and adaptation of non-typeable vanA vancomycin-resistant Enterococcus faecium: a genome-wide investigation

Genomics-informed responses in the elimination of COVID-19 in Victoria, Australia: an observational, genomic epidemiological study

Morbidity from in-hospital complications is greater than treatment failure in patients with Staphylococcus aureus bacteraemia

Persistence of a Frameshifting Deletion in SARS-CoV-2 ORF7a for the Duration of a Major Outbreak

Convergent adaptation in the dominant global hospital clone ST239 of methicillin-resistant Staphylococcus aureus

Global Scale Dissemination of ST93: A Divergent Staphylococcus aureus Epidemic Lineage That Has Recently Emerged From Remote Northern Australia

Assessment of Inter-Laboratory Differences in SARS-CoV-2 Consensus Genome Assemblies between Public Health Laboratories in Australia

When sepsis persists: a review of MRSA bacteraemia salvage therapy

Clinical experience with new formulation SUBA®-itraconazole for prophylaxis in patients undergoing stem cell transplantation or treatment for haematological malignancies

Whole Genome Sequencing Shows Genetic Diversity, as Well as Clonal Complex and Gene Polymorphisms Associated with Fluconazole Non-Susceptible Isolates of Candida tropicalis

The interplay between community and hospital Enterococcus faecium clones within health-care settings: a genomic analysis

Evaluation of the Alfred 60/AST Device as a Screening Test for Urinary Tract Infections

Pathophysiological Response to SARS-CoV-2 Infection Detected by Infrared Spectroscopy Enables Rapid and Robust Saliva Screening for COVID-19

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