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Thousand and one ways to quantify and compare protein abundances in label-free bottom-up proteomics

Biochimica et biophysica acta, 2016-08, Vol.1864 (8), p.883-895

2016

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MassChroQ: A versatile tool for mass spectrometry quantification

Proteomics (Weinheim), 2011-09, Vol.11 (17), p.3572-3577

2011

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The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover

PloS one, 2010-11, Vol.5 (11), p.e13935-e13935

2010

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Increases in activity of proteasome and papain-like cysteine protease in Arabidopsis autophagy mutants: back-up compensatory effect or cell-death promoting effect?

Journal of experimental botany, 2018-03, Vol.69 (6), p.1369-1385

2018

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The quest for tolerant varieties: the importance of integrating "omics" techniques to phenotyping

Frontiers in plant science, 2015-07, Vol.6, p.448

2015

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Phosphoproteome Dynamics Upon Changes in Plant Water Status Reveal Early Events Associated With Rapid Growth Adjustment in Maize Leaves

Molecular & cellular proteomics, 2012-10, Vol.11 (10), p.957-972

2012

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Phosphorylation of the Arabidopsis AtrbohF NADPH oxidase by OST1 protein kinase

FEBS letters, 2009-09, Vol.583 (18), p.2982-2986

2009

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Label-Free Quantitative Proteomics Reveal the Involvement of PRT6 in Arabidopsis thaliana Seed Responsiveness to Ethylene

International journal of molecular sciences, 2022-08, Vol.23 (16), p.9352

2022

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The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize

Journal of experimental botany, 2012-09, Vol.63 (14), p.5017-5033

2012

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Grain subproteome responses to nitrogen and sulfur supply in diploid wheat Triticum monococcum ssp. monococcum

The Plant journal : for cell and molecular biology, 2017-09, Vol.91 (5), p.894-910

2017

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Control of the ethylene signaling pathway prevents plant defenses during intracellular accommodation of the rhizobia

The New phytologist, 2018-07, Vol.219 (1), p.310-323

2018

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The Cell Wall Proteome of Marchantia polymorpha Reveals Specificities Compared to Those of Flowering Plants

Frontiers in plant science, 2022-01, Vol.12, p.765846-765846

2022

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Photosynthetic control of Arabidopsis leaf cytoplasmic translation initiation by protein phosphorylation

PloS one, 2013-07, Vol.8 (7), p.e70692-e70692

2013

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Arabidopsis thaliana root cell wall proteomics: Increasing the proteome coverage using a combinatorial peptide ligand library and description of unexpected Hyp in peroxidase amino acid sequences

Proteomics (Weinheim), 2016-02, Vol.16 (3), p.491-503

2016

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The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6

Frontiers in plant science, 2016-11, Vol.7, p.1611-1611

2016

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Photosynthetic activity influences cellulose biosynthesis and phosphorylation of proteins involved therein in Arabidopsis leaves

Journal of experimental botany, 2014-09, Vol.65 (17), p.4997-5010

2014

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Cell wall proteome analysis of Arabidopsis thaliana mature stems

Proteomics (Weinheim), 2017-04, Vol.17 (8), p.np-n/a

2017

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Dynamics of Protein Phosphorylation during Arabidopsis Seed Germination

International journal of molecular sciences, 2022-07, Vol.23 (13), p.7059

2022

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The ZmASR1 Protein Influences Branched-Chain Amino Acid Biosynthesis and Maintains Kernel Yield in Maize under Water-Limited Conditions

Plant physiology (Bethesda), 2011-10, Vol.157 (2), p.917-936

2011

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Water Deficits Affect Caffeate O-Methyltransferase, Lignification, and Related Enzymes in Maize Leaves. A Proteomic Investigation

Plant physiology (Bethesda), 2005-03, Vol.137 (3), p.949-960

2005

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Proline Hydroxylation in Cell Wall Proteins: Is It Yet Possible to Define Rules?

Frontiers in plant science, 2017-10, Vol.8, p.1802-1802

2017

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Obituary: Dominique Job (1947-2022)

Frontiers in plant science, 2023-05, Vol.14

2023

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Brachypodium distachyon as a model plant toward improved biofuel crops: Search for secreted proteins involved in biogenesis and disassembly of cell wall polymers

Proteomics (Weinheim), 2013-08, Vol.13 (16), p.2438-2454

2013

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An enlarged cell wall proteome of Arabidopsis thaliana rosettes

Proteomics (Weinheim), 2016-12, Vol.16 (24), p.3183-3187

2016

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Thousand and one ways to quantify and compare protein abundances in label-free bottom-up proteomics

MassChroQ: A versatile tool for mass spectrometry quantification

The Arabidopsis ABA-activated kinase OST1 phosphorylates the bZIP transcription factor ABF3 and creates a 14-3-3 binding site involved in its turnover

Increases in activity of proteasome and papain-like cysteine protease in Arabidopsis autophagy mutants: back-up compensatory effect or cell-death promoting effect?

The quest for tolerant varieties: the importance of integrating "omics" techniques to phenotyping

Phosphoproteome Dynamics Upon Changes in Plant Water Status Reveal Early Events Associated With Rapid Growth Adjustment in Maize Leaves

Phosphorylation of the Arabidopsis AtrbohF NADPH oxidase by OST1 protein kinase

Label-Free Quantitative Proteomics Reveal the Involvement of PRT6 in Arabidopsis thaliana Seed Responsiveness to Ethylene

The use of metabolomics integrated with transcriptomic and proteomic studies for identifying key steps involved in the control of nitrogen metabolism in crops such as maize

Grain subproteome responses to nitrogen and sulfur supply in diploid wheat Triticum monococcum ssp. monococcum

Control of the ethylene signaling pathway prevents plant defenses during intracellular accommodation of the rhizobia

The Cell Wall Proteome of Marchantia polymorpha Reveals Specificities Compared to Those of Flowering Plants

Photosynthetic control of Arabidopsis leaf cytoplasmic translation initiation by protein phosphorylation

Arabidopsis thaliana root cell wall proteomics: Increasing the proteome coverage using a combinatorial peptide ligand library and description of unexpected Hyp in peroxidase amino acid sequences

The Arabidopsis TOR Kinase Specifically Regulates the Expression of Nuclear Genes Coding for Plastidic Ribosomal Proteins and the Phosphorylation of the Cytosolic Ribosomal Protein S6

Photosynthetic activity influences cellulose biosynthesis and phosphorylation of proteins involved therein in Arabidopsis leaves

Cell wall proteome analysis of Arabidopsis thaliana mature stems

Dynamics of Protein Phosphorylation during Arabidopsis Seed Germination

Two Cytosolic Glutamine Synthetase Isoforms of Maize Are Specifically Involved in the Control of Grain Production

The ZmASR1 Protein Influences Branched-Chain Amino Acid Biosynthesis and Maintains Kernel Yield in Maize under Water-Limited Conditions

Water Deficits Affect Caffeate O-Methyltransferase, Lignification, and Related Enzymes in Maize Leaves. A Proteomic Investigation

Proline Hydroxylation in Cell Wall Proteins: Is It Yet Possible to Define Rules?

Obituary: Dominique Job (1947-2022)

Brachypodium distachyon as a model plant toward improved biofuel crops: Search for secreted proteins involved in biogenesis and disassembly of cell wall polymers

An enlarged cell wall proteome of Arabidopsis thaliana rosettes

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