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Microbial community adaptation influences long-chain fatty acid conversion during anaerobic codigestion of fats, oils, and grease with municipal sludge

Water research (Oxford), 2016-10, Vol.103, p.372-382

2016

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Long-chain fatty acid feeding frequency in anaerobic codigestion impacts syntrophic community structure and biokinetics

Water research (Oxford), 2017-06, Vol.117 (C), p.218-229

2017

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High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing

Nature methods, 2021-02, Vol.18 (2), p.165-169

2021

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Integrating Genome-Resolved Metagenomics with Trait-Based Process Modeling to Determine Biokinetics of Distinct Nitrifying Communities within Activated Sludge

Environmental science & technology, 2022-08, Vol.56 (16), p.11670-11682

2022

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Advancing environmental biotechnology with microbial community modeling rooted in functional ‘omics

Current opinion in biotechnology, 2024-08, Vol.88, p.103165, Article 103165

2024

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Reducing Cost and Environmental Impact of Wastewater Treatment with Denitrifying Methanotrophs, Anammox, and Mainstream Anaerobic Treatment

Environmental science & technology, 2019-11, Vol.53 (21), p.12935-12944

2019

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Biological contributions to biological ion exchange

Environmental science water research & technology, 2024-03, Vol.1 (4), p.877-888

2024

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Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes

Applied and environmental microbiology, 2022-05, Vol.88 (10), p.e0244921

2022

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DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies

The ISME Journal, 2018-01, Vol.12 (1), p.112-123

2018

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Partitioning of nutrient removal contribution between granules and flocs in a hybrid granular activated sludge system

Water research (Oxford), 2021-09, Vol.203, p.117514-117514, Article 117514

2021

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Microbiome assembly and stability during start-up of a full-scale, two-phase anaerobic digester fed cow manure and mixed organic feedstocks

Bioresource technology, 2024-02, Vol.394, p.130247-130247, Article 130247

2024

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Principles, Advances, and Perspectives of Anaerobic Digestion of Lipids

Environmental science & technology, 2022-04, Vol.56 (8), p.4749-4775

2022

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Prospects for multi-omics in the microbial ecology of water engineering

Water research (Oxford), 2021-10, Vol.205, p.117608-117608, Article 117608

2021

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Importance of sulfide interaction with iron as regulator of the microbial community in biogas reactors and its effect on methanogenesis, volatile fatty acids turnover, and syntrophic long-chain fatty acids degradation

Journal of bioscience and bioengineering, 2017-05, Vol.123 (5), p.597-605

2017

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Assessing Multiplex Tiling PCR Sequencing Approaches for Detecting Genomic Variants of SARS-CoV-2 in Municipal Wastewater

mSystems, 2021-10, Vol.6 (5)

2021

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Microbial rRNA gene expression and co‐occurrence profiles associate with biokinetics and elemental composition in full‐scale anaerobic digesters

Microbial biotechnology, 2018-07, Vol.11 (4), p.694-709

2018

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Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium

The ISME Journal, 2023-12, Vol.17 (12), p.2326-2339

2023

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Elucidating Syntrophic Butyrate-Degrading Populations in Anaerobic Digesters Using Stable-Isotope-Informed Genome-Resolved Metagenomics

mSystems, 2019-08, Vol.4 (4)

2019

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New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters

Biotechnology for biofuels, 2020-02, Vol.13 (1), Article 25

2020

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PUPpy: a primer design pipeline for substrain-level microbial detection and absolute quantification

mSphere, 2024-07, Vol.9 (7), p.e0036024

2024

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Activity-Based Cell Sorting Reveals Resistance of Functionally Degenerate Nitrospira during a Press Disturbance in Nitrifying Activated Sludge

mSystems, 2021-08, Vol.6 (4), p.e0071221-e0071221

2021

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Influence of Bioselector Processes on 17α-Ethinylestradiol Biodegradation in Activated Sludge Wastewater Treatment Systems

Environmental science & technology, 2014-06, Vol.48 (11), p.6160-6167

2014

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Monitoring the dynamics of syntrophic β-oxidizing bacteria during anaerobic degradation of oleic acid by quantitative PCR

FEMS microbiology ecology, 2015-04, Vol.91 (4)

2015

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Feasibility of OFMSW co-digestion with sewage sludge for increasing biogas production at wastewater treatment plants

Euro-Mediterranean journal for environmental integration, 2017-10, Vol.2 (1), p.21, Article 21

2017

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A standardized quantitative analysis strategy for stable isotope probing metagenomics

mSystems, 2023-06, Vol.8 (4), p.e0128022-e0128022

2023

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Microbial community adaptation influences long-chain fatty acid conversion during anaerobic codigestion of fats, oils, and grease with municipal sludge

Long-chain fatty acid feeding frequency in anaerobic codigestion impacts syntrophic community structure and biokinetics

High-accuracy long-read amplicon sequences using unique molecular identifiers with Nanopore or PacBio sequencing

Integrating Genome-Resolved Metagenomics with Trait-Based Process Modeling to Determine Biokinetics of Distinct Nitrifying Communities within Activated Sludge

Advancing environmental biotechnology with microbial community modeling rooted in functional ‘omics

Reducing Cost and Environmental Impact of Wastewater Treatment with Denitrifying Methanotrophs, Anammox, and Mainstream Anaerobic Treatment

Biological contributions to biological ion exchange

Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes

DNA-SIP based genome-centric metagenomics identifies key long-chain fatty acid-degrading populations in anaerobic digesters with different feeding frequencies

Partitioning of nutrient removal contribution between granules and flocs in a hybrid granular activated sludge system

Microbiome assembly and stability during start-up of a full-scale, two-phase anaerobic digester fed cow manure and mixed organic feedstocks

Principles, Advances, and Perspectives of Anaerobic Digestion of Lipids

Prospects for multi-omics in the microbial ecology of water engineering

Importance of sulfide interaction with iron as regulator of the microbial community in biogas reactors and its effect on methanogenesis, volatile fatty acids turnover, and syntrophic long-chain fatty acids degradation

Assessing Multiplex Tiling PCR Sequencing Approaches for Detecting Genomic Variants of SARS-CoV-2 in Municipal Wastewater

Microbial rRNA gene expression and co‐occurrence profiles associate with biokinetics and elemental composition in full‐scale anaerobic digesters

Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium

Elucidating Syntrophic Butyrate-Degrading Populations in Anaerobic Digesters Using Stable-Isotope-Informed Genome-Resolved Metagenomics

New insights from the biogas microbiome by comprehensive genome-resolved metagenomics of nearly 1600 species originating from multiple anaerobic digesters

PUPpy: a primer design pipeline for substrain-level microbial detection and absolute quantification

Activity-Based Cell Sorting Reveals Resistance of Functionally Degenerate Nitrospira during a Press Disturbance in Nitrifying Activated Sludge

Influence of Bioselector Processes on 17α-Ethinylestradiol Biodegradation in Activated Sludge Wastewater Treatment Systems

Monitoring the dynamics of syntrophic β-oxidizing bacteria during anaerobic degradation of oleic acid by quantitative PCR

Feasibility of OFMSW co-digestion with sewage sludge for increasing biogas production at wastewater treatment plants

A standardized quantitative analysis strategy for stable isotope probing metagenomics

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