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Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells

Cell stem cell, 2016-05, Vol.18 (5), p.637-652

2016

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Pan-cancer surveys indicate cell cycle-related roles of primate-specific genes in tumors and embryonic cerebrum

Genome Biology, 2022-12, Vol.23 (1), p.251-29, Article 251

2022

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Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes

Cell, 2021-03, Vol.184 (5), p.1377-1391.e14

2021

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Systematic discovery of DNA-binding tandem repeat proteins

Nucleic acids research, 2024-08, Vol.52 (17), p.10464-10489

2024

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New genes contribute to genetic and phenotypic novelties in human evolution

Current opinion in genetics & development, 2014-12, Vol.29, p.90-96

2014

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Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs

PLoS genetics, 2012-09, Vol.8 (9), p.e1002942

2012

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Low-input PacBio sequencing generates high-quality individual fly genomes and characterizes mutational processes

Nature communications, 2024-07, Vol.15 (1), p.5644-19, Article 5644

2024

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Accelerated recruitment of new brain development genes into the human genome

PLoS biology, 2011-10, Vol.9 (10), p.e1001179-e1001179

2011

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Adaptation and Phenotypic Diversification in Arabidopsis through Loss-of-Function Mutations in Protein-Coding Genes

The Plant cell, 2019-05, Vol.31 (5), p.1012-1025

2019

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Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development

PLoS genetics, 2021-07, Vol.17 (7), p.e1009654-e1009654

2021

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Emergence, Retention and Selection: A Trilogy of Origination for Functional De Novo Proteins from Ancestral LncRNAs in Primates

PLoS genetics, 2015-07, Vol.11 (7), p.e1005391-e1005391

2015

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Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome

PLoS biology, 2010-10, Vol.8 (10), p.e1000494-13

2010

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DNA transposons mediate duplications via transposition-independent and -dependent mechanisms in metazoans

Nature communications, 2021-07, Vol.12 (1), p.4280-14, Article 4280

2021

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Age-dependent chromosomal distribution of male-biased genes in Drosophila

Genome research, 2010-11, Vol.20 (11), p.1526-1533

2010

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RNA editome in rhesus macaque shaped by purifying selection

PLoS genetics, 2014-04, Vol.10 (4), p.e1004274-e1004274

2014

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Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome

PLoS biology, 2012-11, Vol.10 (11), p.e1001420-e1001420

2012

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Direct measurement of pervasive weak repression by microRNAs and their role at the network level

BMC genomics, 2018-05, Vol.19 (1), p.362-362, Article 362

2018

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Evolutionary transition between invertebrates and vertebrates via methylation reprogramming in embryogenesis

National science review, 2019-10, Vol.6 (5), p.993-1003

2019

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Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates

Genome Biology, 2019-02, Vol.20 (1), p.24-24, Article 24

2019

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Resurrection of endogenous retroviruses during aging reinforces senescence

Cell, 2023-01, Vol.186 (2), p.287-304.e26

2023

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New Genes in Drosophila Quickly Become Essential

Science (American Association for the Advancement of Science), 2010-12, Vol.330 (6011), p.1682-1685

2010

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Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021

Nucleic acids research, 2021-01, Vol.49 (D1), p.D18-D28

2021

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Evolutionary mining and functional characterization of TnpB nucleases identify efficient miniature genome editors

Nature biotechnology, 2024-05, Vol.42 (5), p.745-757

2024

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Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

Science (American Association for the Advancement of Science), 2019-06, Vol.364 (6446)

2019

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Divergent lncRNAs Regulate Gene Expression and Lineage Differentiation in Pluripotent Cells

Pan-cancer surveys indicate cell cycle-related roles of primate-specific genes in tumors and embryonic cerebrum

Tracing the genetic footprints of vertebrate landing in non-teleost ray-finned fishes

Systematic discovery of DNA-binding tandem repeat proteins

New genes contribute to genetic and phenotypic novelties in human evolution

Hominoid-specific de novo protein-coding genes originating from long non-coding RNAs

Low-input PacBio sequencing generates high-quality individual fly genomes and characterizes mutational processes

Accelerated recruitment of new brain development genes into the human genome

Adaptation and Phenotypic Diversification in Arabidopsis through Loss-of-Function Mutations in Protein-Coding Genes

Genomic analyses of new genes and their phenotypic effects reveal rapid evolution of essential functions in Drosophila development

Emergence, Retention and Selection: A Trilogy of Origination for Functional De Novo Proteins from Ancestral LncRNAs in Primates

Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome

DNA transposons mediate duplications via transposition-independent and -dependent mechanisms in metazoans

Age-dependent chromosomal distribution of male-biased genes in Drosophila

RNA editome in rhesus macaque shaped by purifying selection

Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome

Direct measurement of pervasive weak repression by microRNAs and their role at the network level

Evolutionary transition between invertebrates and vertebrates via methylation reprogramming in embryogenesis

Evolutionarily significant A-to-I RNA editing events originated through G-to-A mutations in primates

Resurrection of endogenous retroviruses during aging reinforces senescence

New Genes in Drosophila Quickly Become Essential

Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021

Evolutionary mining and functional characterization of TnpB nucleases identify efficient miniature genome editors

Gene expression across mammalian organ development

Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits

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