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Systematic Discovery of FBXW7-Binding Phosphodegrons Highlights Mitogen-Activated Protein Kinases as Important Regulators of Intracellular Protein Levels

International journal of molecular sciences, 2022-03, Vol.23 (6), p.3320

2022

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Co-regulation of the transcription controlling ATF2 phosphoswitch by JNK and p38

Nature communications, 2020-11, Vol.11 (1), p.5769-5769, Article 5769

2020

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The eukaryotic linear motif resource - 2018 update

Nucleic acids research, 2018-01, Vol.46 (D1), p.D428

2018

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The Eukaryotic Linear Motif resource: 2022 release

Nucleic acids research, 2022-01, Vol.50 (D1), p.D497

2022

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Deep structural insights into RNA‐binding disordered protein regions

Wiley interdisciplinary reviews. RNA, 2022-09, Vol.13 (5), p.e1714-n/a

2022

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PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning

Bioinformatics, 2021-12, Vol.37 (23), p.4328-4335

2021

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Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling

Nature communications, 2022-09, Vol.13 (1), p.5439-5439, Article 5439

2022

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Systematic discovery of linear binding motifs targeting an ancient protein interaction surface on MAP kinases

Molecular systems biology, 2015-11, Vol.11 (11), p.837-n/a

2015

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Discovery and Characterization of Linear Motif Mediated Protein-Protein Complexes

Advanced Technologies for Protein Complex Production and Characterization, 2024, Vol.1453, p.59-71

2024

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UniTmp: unified resources for transmembrane proteins

Nucleic acids research, 2024-01, Vol.52 (D1), p.D572

2024

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JNK Signaling: Regulation and Functions Based on Complex Protein-Protein Partnerships

Microbiology and molecular biology reviews, 2016-09, Vol.80 (3), p.793-835

2016

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PolarProtDb: A Database of Transmembrane and Secreted Proteins showing Apical-Basal Polarity

Journal of molecular biology, 2021-05, Vol.433 (11), p.166705-166705, Article 166705

2021

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Scaffolds: interaction platforms for cellular signalling circuits

Trends in cell biology, 2009-08, Vol.19 (8), p.364-374

2009

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ELM-the Eukaryotic Linear Motif resource-2024 update

Nucleic acids research, 2024-01, Vol.52 (D1), p.D442

2024

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A rapid and concise setup for the fast screening of FRET pairs using bioorthogonalized fluorescent dyes

Organic & biomolecular chemistry, 2018-04, Vol.16 (16), p.2997-3005

2018

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LeishMANIAdb: a comparative resource for Leishmania proteins

Database : the journal of biological databases and curation, 2023-10, Vol.2023

2023

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Structural assembly of the signaling competent ERK2–RSK1 heterodimeric protein kinase complex

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (9), p.2711-2716

2015

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Systematic analysis of somatic mutations driving cancer: uncovering functional protein regions in disease development

Biology direct, 2016-05, Vol.11 (23), p.23-23, Article 23

2016

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TmAlphaFold database: membrane localization and evaluation of AlphaFold2 predicted alpha-helical transmembrane protein structures

Nucleic acids research, 2023-01, Vol.51 (D1), p.D517

2023

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Linear motifs regulating protein secretion, sorting and autophagy in Leishmania parasites are diverged with respect to their host equivalents

PLoS computational biology, 2024-02, Vol.20 (2), p.e1011902-e1011902

2024

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Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies

Biomolecules (Basel, Switzerland), 2021-03, Vol.11 (3), p.381

2021

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Ancient Evolutionary Origin of Intrinsically Disordered Cancer Risk Regions

Biomolecules (Basel, Switzerland), 2020-07, Vol.10 (8), p.1115

2020

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The NSP14/NSP10 RNA repair complex as a Pan-coronavirus therapeutic target

Cell death and differentiation, 2022-02, Vol.29 (2), p.285-292

2022

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PARP1-dependent recruitment of the FBXL10-RNF68-RNF2 ubiquitin ligase to sites of DNA damage controls H2A.Z loading

eLife, 2018-07, Vol.7

2018

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Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove

Science signaling, 2012-10, Vol.5 (245), p.ra74

2012

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Systematic Discovery of FBXW7-Binding Phosphodegrons Highlights Mitogen-Activated Protein Kinases as Important Regulators of Intracellular Protein Levels

Co-regulation of the transcription controlling ATF2 phosphoswitch by JNK and p38

The eukaryotic linear motif resource - 2018 update

The Eukaryotic Linear Motif resource: 2022 release

Deep structural insights into RNA‐binding disordered protein regions

PolarProtPred: predicting apical and basolateral localization of transmembrane proteins using putative short linear motifs and deep learning

Structural insights into the pSer/pThr dependent regulation of the SHP2 tyrosine phosphatase in insulin and CD28 signaling

Systematic discovery of linear binding motifs targeting an ancient protein interaction surface on MAP kinases

Discovery and Characterization of Linear Motif Mediated Protein-Protein Complexes

UniTmp: unified resources for transmembrane proteins

JNK Signaling: Regulation and Functions Based on Complex Protein-Protein Partnerships

PolarProtDb: A Database of Transmembrane and Secreted Proteins showing Apical-Basal Polarity

Scaffolds: interaction platforms for cellular signalling circuits

ELM-the Eukaryotic Linear Motif resource-2024 update

A rapid and concise setup for the fast screening of FRET pairs using bioorthogonalized fluorescent dyes

LeishMANIAdb: a comparative resource for Leishmania proteins

Structural assembly of the signaling competent ERK2–RSK1 heterodimeric protein kinase complex

Systematic analysis of somatic mutations driving cancer: uncovering functional protein regions in disease development

TmAlphaFold database: membrane localization and evaluation of AlphaFold2 predicted alpha-helical transmembrane protein structures

Linear motifs regulating protein secretion, sorting and autophagy in Leishmania parasites are diverged with respect to their host equivalents

Mutations of Intrinsically Disordered Protein Regions Can Drive Cancer but Lack Therapeutic Strategies

Ancient Evolutionary Origin of Intrinsically Disordered Cancer Risk Regions

The NSP14/NSP10 RNA repair complex as a Pan-coronavirus therapeutic target

PARP1-dependent recruitment of the FBXL10-RNF68-RNF2 ubiquitin ligase to sites of DNA damage controls H2A.Z loading

Specificity of linear motifs that bind to a common mitogen-activated protein kinase docking groove

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