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Ferroptosis occurs through an osmotic mechanism and propagates independently of cell rupture

Nature cell biology, 2020-09, Vol.22 (9), p.1042

2020

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Preprint Highlight: 7-UP: generating in silico CODEX from a small set of immunofluorescence markers

Molecular biology of the cell, 2023-05, Vol.34 (5)

Zaritsky, Assaf

2023

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Preprint Highlight: Learning orientation-invariant representations enables accurate and robust morphologic profiling of cells and organelles

Molecular biology of the cell, 2023-05, Vol.34 (5)

Zaritsky, Assaf

2023

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Machine learning inference of continuous single-cell state transitions during myoblast differentiation and fusion

Molecular systems biology, 2024-03, Vol.20 (3), p.217-241

2024

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Preprint Highlight: Event-driven acquisition for content-enriched microscopy

Molecular biology of the cell, 2022-10, Vol.33 (12)

Zaritsky, Assaf

2022

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Preprint Highlight: Automatic detection of spatiotemporal signaling patterns in cell collectives

Molecular biology of the cell, 2022-10, Vol.33 (12)

Zaritsky, Assaf

2022

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Preprint Highlight: Virtual screening for small molecule pathway regulators by image profile matching

Molecular biology of the cell, 2022-10, Vol.33 (12)

Zaritsky, Assaf

2022

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Preprint Highlight: Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks

Molecular biology of the cell, 2022-09, Vol.33 (10)

Zaritsky, Assaf

2022

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Preprint Highlight: Self‐supervised deep learning encodes high-resolution features of protein subcellular localization

Molecular biology of the cell, 2022-08, Vol.33 (9)

Zaritsky, Assaf

2022

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Sharing and reusing cell image data

Molecular biology of the cell, 2018-06, Vol.29 (11), p.1274-1280

2018

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Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration

Cell systems, 2016-09, Vol.3 (3), p.252-263.e8

2016

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Quantitative Live Imaging of Human Embryonic Stem Cell Derived Neural Rosettes Reveals Structure-Function Dynamics Coupled to Cortical Development

PLoS computational biology, 2015-10, Vol.11 (10), p.e1004453-e1004453

2015

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Propagating waves of directionality and coordination orchestrate collective cell migration

PLoS computational biology, 2014-07, Vol.10 (7), p.e1003747-e1003747

2014

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Emergence of HGF/SF-induced coordinated cellular motility

PloS one, 2012-09, Vol.7 (9), p.e44671-e44671

2012

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Using Unlabeled Information of Embryo Siblings from the Same Cohort Cycle to Enhance In Vitro Fertilization Implantation Prediction

Advanced science, 2023-09, Vol.10 (27), p.e2207711-e2207711

2023

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Decoupling global biases and local interactions between cell biological variables

eLife, 2017-03, Vol.6

2017

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Inference of long-range cell-cell force transmission from ECM remodeling fluctuations

Communications biology, 2023-08, Vol.6 (1), p.811-811, Article 811

2023

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The metastatic microenvironment: Claudin‐1 suppresses the malignant phenotype of melanoma brain metastasis

International journal of cancer, 2015-03, Vol.136 (6), p.1296-1307

2015

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Cell biologists should specialize, not hybridize

Nature (London), 2016-07, Vol.535 (7612), p.325-325

Zaritsky, Assaf

2016

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Cell motility dynamics: a novel segmentation algorithm to quantify multi-cellular bright field microscopy images

PloS one, 2011-11, Vol.6 (11), p.e27593-e27593

2011

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Differential dynamics of early stages of platelet adhesion and spreading on collagen IV- and fibrinogen-coated surfaces [version 2; peer review: 3 approved]

F1000 research, 2020, Vol.9, p.449

2020

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Cell biologists should specialize, not hybridize: dry cell biologists, who bridge computer science and cell biology, should have a pivotal role in driving effective team science.(WORLD VIEW: A personal take on events)

Nature (London), 2016-07, Vol.535 (7612), p.325

Zaritsky, Assaf

2016

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In silico labeling in cell biology: Potential and limitations

Current opinion in cell biology, 2024-08, Vol.89, p.102378-102378, Article 102378

2024

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Differential dynamics of early stages of platelet adhesion and spreading on collagen IV- and fibrinogen-coated surfaces [version 1; peer review: 3 approved]

F1000 research, 2020, Vol.9, p.449

2020

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Challenges and Technological Trends Toward Improved Medical Imaging-based Predictive Data-mining

EBioMedicine, 2018-09, Vol.35, p.20-21

Zaritsky, Assaf

2018

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Ferroptosis occurs through an osmotic mechanism and propagates independently of cell rupture

Preprint Highlight: 7-UP: generating in silico CODEX from a small set of immunofluorescence markers

Preprint Highlight: Learning orientation-invariant representations enables accurate and robust morphologic profiling of cells and organelles

Machine learning inference of continuous single-cell state transitions during myoblast differentiation and fusion

Preprint Highlight: Event-driven acquisition for content-enriched microscopy

Preprint Highlight: Automatic detection of spatiotemporal signaling patterns in cell collectives

Preprint Highlight: Virtual screening for small molecule pathway regulators by image profile matching

Preprint Highlight: Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks

Preprint Highlight: Self‐supervised deep learning encodes high-resolution features of protein subcellular localization

Sharing and reusing cell image data

Vimentin Intermediate Filaments Template Microtubule Networks to Enhance Persistence in Cell Polarity and Directed Migration

Quantitative Live Imaging of Human Embryonic Stem Cell Derived Neural Rosettes Reveals Structure-Function Dynamics Coupled to Cortical Development

Propagating waves of directionality and coordination orchestrate collective cell migration

Emergence of HGF/SF-induced coordinated cellular motility

Using Unlabeled Information of Embryo Siblings from the Same Cohort Cycle to Enhance In Vitro Fertilization Implantation Prediction

Decoupling global biases and local interactions between cell biological variables

Inference of long-range cell-cell force transmission from ECM remodeling fluctuations

The metastatic microenvironment: Claudin‐1 suppresses the malignant phenotype of melanoma brain metastasis

Cell biologists should specialize, not hybridize

Cell motility dynamics: a novel segmentation algorithm to quantify multi-cellular bright field microscopy images

Differential dynamics of early stages of platelet adhesion and spreading on collagen IV- and fibrinogen-coated surfaces [version 2; peer review: 3 approved]

Cell biologists should specialize, not hybridize: dry cell biologists, who bridge computer science and cell biology, should have a pivotal role in driving effective team science.(WORLD VIEW: A personal take on events)

In silico labeling in cell biology: Potential and limitations

Differential dynamics of early stages of platelet adhesion and spreading on collagen IV- and fibrinogen-coated surfaces [version 1; peer review: 3 approved]

Challenges and Technological Trends Toward Improved Medical Imaging-based Predictive Data-mining

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