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Computational Study of Bond Dissociation Enthalpies for a Large Range of Native and Modified Lignins

The journal of physical chemistry letters, 2011-11, Vol.2 (22), p.2846-2852

2011

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Metaproteomics reveals enzymatic strategies deployed by anaerobic microbiomes to maintain lignocellulose deconstruction at high solids

Nature communications, 2022-07, Vol.13 (1), p.3870-3870, Article 3870

2022

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Molecular-Level Origins of Biomass Recalcitrance: Decrystallization Free Energies for Four Common Cellulose Polymorphs

The journal of physical chemistry. B, 2011-04, Vol.115 (14), p.4118-4127

2011

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Bayesian inference of metabolic kinetics from genome-scale multiomics data

PLoS computational biology, 2019-11, Vol.15 (11), p.e1007424-e1007424

2019

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Coupled-cluster methods including noniterative corrections for quadruple excitations

The Journal of chemical physics, 2005-08, Vol.123 (5), p.054101-054101

2005

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Applications of computational science for understanding enzymatic deconstruction of cellulose

Current opinion in biotechnology, 2011-04, Vol.22 (2), p.231-238

2011

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Predicting Enzyme Adsorption to Lignin Films by Calculating Enzyme Surface Hydrophobicity

The Journal of biological chemistry, 2014-07, Vol.289 (30), p.20960-20969

2014

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Glycosyltransferase family 47 (GT47) proteins in plants and animals

Essays in biochemistry, 2023-04, Vol.67 (3), p.639-652

2023

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Occurrence of Thermophilic Microorganisms in Different Full Scale Biogas Plants

International journal of molecular sciences, 2019-12, Vol.21 (1), p.283

2019

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Rational enzyme design for controlled functionalization of acetylated xylan for cell-free polymer biosynthesis

Carbohydrate polymers, 2021-12, Vol.273, p.118564-118564, Article 118564

2021

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Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water‐mediated mechanism

The Plant journal : for cell and molecular biology, 2017-09, Vol.91 (6), p.931-949

2017

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Approaches to Computational Strain Design in the Multiomics Era

Frontiers in microbiology, 2019-04, Vol.10, p.597-597

2019

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Streamlining heterologous expression of top carbonic anhydrases in Escherichia coli: bioinformatic and experimental approaches

Microbial cell factories, 2024-07, Vol.23 (1), p.190-13, Article 190

2024

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Synthetic fungal multifunctional cellulases for enhanced biomass conversion

Green chemistry : an international journal and green chemistry resource : GC, 2020, Vol.22 (2), p.478-489

2020

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Homologous expression of the Caldicellulosiruptor bescii CelA reveals that the extracellular protein is glycosylated

PloS one, 2015-03, Vol.10 (3), p.e0119508-e0119508

2015

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Characterization of the Biomass Degrading Enzyme GuxA from Acidothermus cellulolyticus

International journal of molecular sciences, 2022-05, Vol.23 (11), p.6070

2022

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Disruption of the Snf1 Gene Enhances Cell Growth and Reduces the Metabolic Burden in Cellulase-Expressing and Lipid-Accumulating Yarrowia lipolytica

Frontiers in microbiology, 2021-12, Vol.12, p.757741-757741

2021

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The Multi Domain Caldicellulosiruptor bescii CelA Cellulase Excels at the Hydrolysis of Crystalline Cellulose

Scientific reports, 2017-08, Vol.7 (1), p.9622-17, Article 9622

2017

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Nanoscale resolution of microbial fiber degradation in action

eLife, 2022-05, Vol.11

2022

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Prediction of reaction knockouts to maximize succinate production by Actinobacillus succinogenes

PloS one, 2018-01, Vol.13 (1), p.e0189144-e0189144

2018

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Advances in integrative structural biology: Towards understanding protein complexes in their cellular context

Computational and structural biotechnology journal, 2021-01, Vol.19, p.214-225

2021

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Identification of Amino Acids Responsible for Processivity in a Family 1 Carbohydrate-Binding Module from a Fungal Cellulase

The journal of physical chemistry. B, 2010-01, Vol.114 (3), p.1447-1453

2010

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Simultaneous expression of an endogenous spermidine synthase and a butanol dehydrogenase from Thermoanaerobacter pseudethanolicus in Clostridium thermocellum results in increased resistance to acetic acid and furans, increased ethanol production and an increase in thermotolerance

Biotechnology for biofuels and bioproducts, 2023-03, Vol.16 (1), p.46-46, Article 46

2023

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Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

PloS one, 2016-01, Vol.11 (1), p.e0145848-e0145848

2016

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The O-Glycosylated Linker from the Trichoderma reesei Family 7 Cellulase Is a Flexible, Disordered Protein

Biophysical journal, 2010-12, Vol.99 (11), p.3773-3781

2010

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Computational Study of Bond Dissociation Enthalpies for a Large Range of Native and Modified Lignins

Metaproteomics reveals enzymatic strategies deployed by anaerobic microbiomes to maintain lignocellulose deconstruction at high solids

Molecular-Level Origins of Biomass Recalcitrance: Decrystallization Free Energies for Four Common Cellulose Polymorphs

Bayesian inference of metabolic kinetics from genome-scale multiomics data

Coupled-cluster methods including noniterative corrections for quadruple excitations

Applications of computational science for understanding enzymatic deconstruction of cellulose

Predicting Enzyme Adsorption to Lignin Films by Calculating Enzyme Surface Hydrophobicity

Glycosyltransferase family 47 (GT47) proteins in plants and animals

Occurrence of Thermophilic Microorganisms in Different Full Scale Biogas Plants

Rational enzyme design for controlled functionalization of acetylated xylan for cell-free polymer biosynthesis

Structural, mutagenic and in silico studies of xyloglucan fucosylation in Arabidopsis thaliana suggest a water‐mediated mechanism

Approaches to Computational Strain Design in the Multiomics Era

Streamlining heterologous expression of top carbonic anhydrases in Escherichia coli: bioinformatic and experimental approaches

Synthetic fungal multifunctional cellulases for enhanced biomass conversion

Homologous expression of the Caldicellulosiruptor bescii CelA reveals that the extracellular protein is glycosylated

Characterization of the Biomass Degrading Enzyme GuxA from Acidothermus cellulolyticus

Disruption of the Snf1 Gene Enhances Cell Growth and Reduces the Metabolic Burden in Cellulase-Expressing and Lipid-Accumulating Yarrowia lipolytica

The Multi Domain Caldicellulosiruptor bescii CelA Cellulase Excels at the Hydrolysis of Crystalline Cellulose

Nanoscale resolution of microbial fiber degradation in action

Prediction of reaction knockouts to maximize succinate production by Actinobacillus succinogenes

Advances in integrative structural biology: Towards understanding protein complexes in their cellular context

Identification of Amino Acids Responsible for Processivity in a Family 1 Carbohydrate-Binding Module from a Fungal Cellulase

Simultaneous expression of an endogenous spermidine synthase and a butanol dehydrogenase from Thermoanaerobacter pseudethanolicus in Clostridium thermocellum results in increased resistance to acetic acid and furans, increased ethanol production and an increase in thermotolerance

Comparing Residue Clusters from Thermophilic and Mesophilic Enzymes Reveals Adaptive Mechanisms

The O-Glycosylated Linker from the Trichoderma reesei Family 7 Cellulase Is a Flexible, Disordered Protein

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