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Solvation effects on diffusion processes of a macromolecule: Accuracy required for radial distribution function to calculate diffusion coefficient

The Journal of chemical physics, 2021-02, Vol.154 (8), p.084501-084501

2021

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Dynamic Monte Carlo calculation generating particle trajectories that satisfy the diffusion equation for heterogeneous systems with a position-dependent diffusion coefficient and free energy

The Journal of chemical physics, 2022-04, Vol.156 (15), p.154506-154506

2022

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Usefulness of higher-order system-size correction for macromolecule diffusion coefficients: A molecular dynamics study

Chemical physics letters, 2022-11, Vol.807, p.140096, Article 140096

2022

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Reduced density profile of small particles near a large particle: Results of an integral equation theory with an accurate bridge function and a Monte Carlo simulation

The Journal of chemical physics, 2019-07, Vol.151 (4), p.044506-044506

2019

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Stick boundary condition at large hard sphere arising from effective attraction in binary hard-sphere mixtures

The Journal of chemical physics, 2018-03, Vol.148 (12), p.124502-124502

2018

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New conditions for validity of the centroid molecular dynamics and ring polymer molecular dynamics

The Journal of chemical physics, 2008-06, Vol.128 (23), p.234105-234105

Yoshimori, Akira

2008

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Solid phase stability of a double-minimum interaction potential system

The Journal of chemical physics, 2014-06, Vol.140 (24), p.244501-244501

2014

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Effects of interactions between particles on dynamics in microrheology

Journal of molecular liquids, 2014-12, Vol.200, p.81-84

2014

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Molecular dynamics study of fast dielectric relaxation of water around a molecular-sized ion

The Journal of chemical physics, 2012-12, Vol.137 (22), p.224502-224502

2012

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Dynamics of the entropic insertion of a large sphere into a cylindrical vessel

The Journal of chemical physics, 2016-03, Vol.144 (10), p.105103-105103

2016

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Derivation of the nonlinear fluctuating hydrodynamic equation from the underdamped Langevin equation

Journal of physics. A, Mathematical and theoretical, 2009-02, Vol.42 (6), p.065001-065001 (15)

2009

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A theoretical framework for calculations of the structural relaxation time on the basis of the free energy landscape theory

Chemical physics letters, 2013-07, Vol.577, p.58-61

2013

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Nonlinear effects on solvation dynamics in simple mixtures

The Journal of chemical physics, 2006-12, Vol.125 (24), p.244501-244501-8

2006

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Theoretical investigation of interaction measurements in liquid systems with viscosity distributions

Physica A, 2024-08, Vol.647, p.129918, Article 129918

2024

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Reciprocal relations associated with linear responses to mechanical and thermal perturbations in nonequilibrium Langevin systems

Physical review. E, 2018-10, Vol.98 (4), Article 042120

2018

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Coarse-grained forms for equations describing the microscopic motion of particles in a fluid

Physical review. E, Statistical, nonlinear, and soft matter physics, 2013-10, Vol.88 (4), p.043008-043008, Article 043008

2013

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Specific heat anomaly at the glass transition

The Journal of chemical physics, 2002-12, Vol.117 (22), p.10151-10155

2002

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New conditions for validity of the centroid molecular dynamicsand ring polymer molecular dynamics

The Journal of chemical physics, 2008-06, Vol.128 (23), p.234105-234105-11

Yoshimori, Akira

2008

Volltextzugriff (PDF)

Nonlinear effects of number density of solvent molecules on solvation dynamics

The Journal of chemical physics, 1996-10, Vol.105 (14), p.5971-5978

Yoshimori, Akira

1996

Volltextzugriff (PDF)

Separation of Dynamics in the Free Energy Landscape

Complex Systems (AIP Conference Proceedings Volume 982), 2008, Vol.982, p.211-214

2008

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Microscopic derivation of time-dependent density functional methods

Physical review. E, Statistical, nonlinear, and soft matter physics, 2005-03, Vol.71 (3 Pt 1), p.031203-031203, Article 031203

Yoshimori, Akira

2005

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Variability in timing and magnitude of spring bloom in the Oyashio region, the western subarctic Pacific off Hokkaido, Japan

Fisheries oceanography, 1997-07, Vol.6 (2), p.118-129

1997

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Theory of ion solvation dynamics in mixed dipolar solvents

The Journal of chemical physics, 1998-08, Vol.109 (8), p.3222-3231

1998

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An investigation of dynamical density functional theory for solvation in simple mixtures

The Journal of chemical physics, 1998-04, Vol.108 (15), p.6378-6386

1998

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Localization transition in the vitrification process

Physica. B, Condensed matter, 2001-02, Vol.296 (1), p.174-179

2001

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Solvation effects on diffusion processes of a macromolecule: Accuracy required for radial distribution function to calculate diffusion coefficient

Dynamic Monte Carlo calculation generating particle trajectories that satisfy the diffusion equation for heterogeneous systems with a position-dependent diffusion coefficient and free energy

Usefulness of higher-order system-size correction for macromolecule diffusion coefficients: A molecular dynamics study

Reduced density profile of small particles near a large particle: Results of an integral equation theory with an accurate bridge function and a Monte Carlo simulation

Stick boundary condition at large hard sphere arising from effective attraction in binary hard-sphere mixtures

New conditions for validity of the centroid molecular dynamics and ring polymer molecular dynamics

Solid phase stability of a double-minimum interaction potential system

Effects of interactions between particles on dynamics in microrheology

Molecular dynamics study of fast dielectric relaxation of water around a molecular-sized ion

Dynamics of the entropic insertion of a large sphere into a cylindrical vessel

Derivation of the nonlinear fluctuating hydrodynamic equation from the underdamped Langevin equation

A theoretical framework for calculations of the structural relaxation time on the basis of the free energy landscape theory

Nonlinear effects on solvation dynamics in simple mixtures

Theoretical investigation of interaction measurements in liquid systems with viscosity distributions

Reciprocal relations associated with linear responses to mechanical and thermal perturbations in nonequilibrium Langevin systems

Coarse-grained forms for equations describing the microscopic motion of particles in a fluid

Specific heat anomaly at the glass transition

New conditions for validity of the centroid molecular dynamicsand ring polymer molecular dynamics

Nonlinear effects of number density of solvent molecules on solvation dynamics

Separation of Dynamics in the Free Energy Landscape

Microscopic derivation of time-dependent density functional methods

Variability in timing and magnitude of spring bloom in the Oyashio region, the western subarctic Pacific off Hokkaido, Japan

Theory of ion solvation dynamics in mixed dipolar solvents

An investigation of dynamical density functional theory for solvation in simple mixtures

Localization transition in the vitrification process

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