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Engineering Infrequent DNA Nicking Endonuclease by Fusion of a BamHI Cleavage-Deficient Mutant and a DNA Nicking Domain

Frontiers in microbiology, 2022-02, Vol.12, p.787073-787073

Xu, Shuang-yong

2022

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Balancing Herbal Medicine and Functional Food for Prevention and Treatment of Cardiometabolic Diseases through Modulating Gut Microbiota

Frontiers in microbiology, 2017-11, Vol.8, p.2146-2146

2017

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High-throughput sequencing of EcoWI restriction fragments maps the genome-wide landscape of phosphorothioate modification at base resolution

PLoS genetics, 2022-09, Vol.18 (9), p.e1010389-e1010389

2022

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Characterization of winged helix domain fusion endonucleases as N6-methyladenine-dependent type IV restriction systems

Frontiers in microbiology, 2024-04, Vol.15, p.1286822-1286822

2024

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NicE-seq: high resolution open chromatin profiling

Genome Biology, 2017-06, Vol.18 (1), p.122-122, Article 122

2017

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Restriction and modification of deoxyarchaeosine (dG+)-containing phage 9 g DNA

Scientific reports, 2017-08, Vol.7 (1), p.8348-13, Article 8348

2017

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In vitro Type II Restriction of Bacteriophage DNA With Modified Pyrimidines

Frontiers in microbiology, 2020-10, Vol.11, p.604618-604618

2020

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Expression of Human ACE2 N-terminal Domain, Part of the Receptor for SARS-CoV-2, in Fusion With Maltose-Binding Protein, E. coli Ribonuclease I and Human RNase A

Frontiers in microbiology, 2021-06, Vol.12, p.660149-660149

2021

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Erasure of Tet-Oxidized 5-Methylcytosine by a SRAP Nuclease

Cell reports (Cambridge), 2017-10, Vol.21 (2), p.482-494

2017

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Sequence-specific DNA nicking endonucleases

Biomolecular concepts, 2015-08, Vol.6 (4), p.253-267

Xu, Shuang-yong

2015

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A type IV modification-dependent restriction enzyme SauUSI from Staphylococcus aureus subsp. aureus USA300

Nucleic acids research, 2011-07, Vol.39 (13), p.5597-5610

2011

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The MspJI family of modification-dependent restriction endonucleases for epigenetic studies

Proceedings of the National Academy of Sciences - PNAS, 2011-07, Vol.108 (27), p.11040-11045

2011

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Type II Restriction of Bacteriophage DNA With 5hmdU-Derived Base Modifications

Frontiers in microbiology, 2019-03, Vol.10, p.584-584

2019

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Characterization of BisI Homologs

Frontiers in microbiology, 2021-07, Vol.12, p.689929-689929

2021

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Protein Domain Guided Screen for Sequence Specific and Phosphorothioate-Dependent Restriction Endonucleases

Frontiers in microbiology, 2020-08, Vol.11, p.1960-1960

2020

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Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Clinical epigenetics, 2020-09, Vol.12 (1), p.143-143, Article 143

2020

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Mechanism of DNA cleavage by the endonuclease SauUSI: a major barrier to horizontal gene transfer and antibiotic resistance in Staphylococcus aureus

Nucleic acids research, 2021-02, Vol.49 (4), p.2161-2178

2021

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Crystal structure of the modification-dependent SRA-HNH endonuclease TagI

Nucleic acids research, 2018-11

2018

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The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activity

PloS one, 2013-11, Vol.8 (11), p.e80967-e80967

2013

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Towards electrosynthesis in shewanella: energetics of reversing the mtr pathway for reductive metabolism

PloS one, 2011-02, Vol.6 (2), p.e16649-e16649

2011

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Crystal structures of the EVE-HNH endonuclease VcaM4I in the presence and absence of DNA

Nucleic acids research, 2021-02, Vol.49 (3), p.1708-1723

2021

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Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers

PloS one, 2010-05, Vol.5 (5), p.e10563-e10563

2010

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Expression and Purification of BsaXI Restriction Endonuclease and Engineering New Specificity From BsaXI Specificity Subunit

Frontiers in microbiology, 2022-05, Vol.13, p.888435-888435

2022

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A protein architecture guided screen for modification dependent restriction endonucleases

Nucleic acids research, 2019-10, Vol.47 (18), p.9761-9776

2019

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TALE-PvuII fusion proteins--novel tools for gene targeting

PloS one, 2013-12, Vol.8 (12), p.e82539

2013

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Engineering Infrequent DNA Nicking Endonuclease by Fusion of a BamHI Cleavage-Deficient Mutant and a DNA Nicking Domain

Balancing Herbal Medicine and Functional Food for Prevention and Treatment of Cardiometabolic Diseases through Modulating Gut Microbiota

High-throughput sequencing of EcoWI restriction fragments maps the genome-wide landscape of phosphorothioate modification at base resolution

Characterization of winged helix domain fusion endonucleases as N6-methyladenine-dependent type IV restriction systems

NicE-seq: high resolution open chromatin profiling

Restriction and modification of deoxyarchaeosine (dG+)-containing phage 9 g DNA

In vitro Type II Restriction of Bacteriophage DNA With Modified Pyrimidines

Expression of Human ACE2 N-terminal Domain, Part of the Receptor for SARS-CoV-2, in Fusion With Maltose-Binding Protein, E. coli Ribonuclease I and Human RNase A

Erasure of Tet-Oxidized 5-Methylcytosine by a SRAP Nuclease

Sequence-specific DNA nicking endonucleases

A type IV modification-dependent restriction enzyme SauUSI from Staphylococcus aureus subsp. aureus USA300

The MspJI family of modification-dependent restriction endonucleases for epigenetic studies

Type II Restriction of Bacteriophage DNA With 5hmdU-Derived Base Modifications

Characterization of BisI Homologs

Protein Domain Guided Screen for Sequence Specific and Phosphorothioate-Dependent Restriction Endonucleases

Universal NicE-seq for high-resolution accessible chromatin profiling for formaldehyde-fixed and FFPE tissues

Mechanism of DNA cleavage by the endonuclease SauUSI: a major barrier to horizontal gene transfer and antibiotic resistance in Staphylococcus aureus

Crystal structure of the modification-dependent SRA-HNH endonuclease TagI

The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activity

Towards electrosynthesis in shewanella: energetics of reversing the mtr pathway for reductive metabolism

Crystal structures of the EVE-HNH endonuclease VcaM4I in the presence and absence of DNA

Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers

Expression and Purification of BsaXI Restriction Endonuclease and Engineering New Specificity From BsaXI Specificity Subunit

A protein architecture guided screen for modification dependent restriction endonucleases

TALE-PvuII fusion proteins--novel tools for gene targeting

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