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Bayesian analysis using a simple likelihood model outperforms parsimony for estimation of phylogeny from discrete morphological data

PloS one, 2014-10, Vol.9 (10), p.e109210-e109210

2014

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Genomic data support the taxonomic validity of Middle American livebearers Poeciliopsis gracilis and Poeciliopsis pleurospilus (Cyprinodontiformes: Poeciliidae)

PloS one, 2022-01, Vol.17 (1), p.e0262687

2022

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From panic to pedagogy: Using online active learning to promote inclusive instruction in ecology and evolutionary biology courses and beyond

Ecology and evolution, 2020-11, Vol.10 (22), p.12581-12612

2020

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PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

Molecular biology and evolution, 2017-03, Vol.34 (3), p.772-773

2017

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Long-branch attraction and the phylogeny of true water bugs (Hemiptera: Nepomorpha) as estimated from mitochondrial genomes

BMC evolutionary biology, 2014-05, Vol.14 (1), p.99, Article 99

2014

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Species delimitation in endangered groundwater salamanders: Implications for aquifer management and biodiversity conservation

Proceedings of the National Academy of Sciences - PNAS, 2019-02, Vol.116 (7), p.2624-2633

2019

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Modeling Character Change Heterogeneity in Phylogenetic Analyses of Morphology through the Use of Priors

Systematic biology, 2016-07, Vol.65 (4), p.602-611

2016

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The why, when, and how of computing in biology classrooms [version 1; peer review: 2 approved]

F1000 research, 2019, Vol.8, p.1854

2019

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Integrating Fossil Observations Into Phylogenetics Using the Fossilized Birth–Death Model

Annual review of ecology, evolution, and systematics, 2022-11, Vol.53 (1), p.251-273

2022

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A Systematist’s Guide to Estimating Bayesian Phylogenies From Morphological Data

Insect systematics and diversity, 2019-05, Vol.3 (3)

Wright, April M

2019

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The Fundamental Role of Character Coding in Bayesian Morphological Phylogenetics

Systematic biology, 2024-10, Vol.73 (5), p.861-871

2024

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Editor's note on ‘Putting fossils in trees’ special issue

Biology letters (2005), 2017-03, Vol.13 (3), p.20170103-20170103

Wright, April M.

2017

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Bayesian analyses in phylogenetic palaeontology: interpreting the posterior sample

Palaeontology, 2020-11, Vol.63 (6), p.997-1006

2020

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Handling Logical Character Dependency in Phylogenetic Inference: Extensive Performance Testing of Assumptions and Solutions Using Simulated and Empirical Data

Systematic biology, 2023-06, Vol.72 (3), p.662-680

2023

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Shared Escovopsis parasites between leaf-cutting and non-leaf-cutting ants in the higher attine fungus-growing ant symbiosis

Royal Society open science, 2015-09, Vol.2 (9), p.150257-150257

2015

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Phylogenetic patterns of ant–fungus associations indicate that farming strategies, not only a superior fungal cultivar, explain the ecological success of leafcutter ants

Molecular ecology, 2018-05, Vol.27 (10), p.2414-2434

2018

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Revticulate: An R framework for interaction with RevBayes

Methods in ecology and evolution, 2022-06, Vol.13 (6), p.1177-1184

2022

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The why, when, and how of computing in biology classrooms [version 2; peer review: 2 approved]

F1000 research, 2019-01, Vol.8, p.1854-1854

2019

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Which came first: The lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states

Journal of experimental zoology. Part B, Molecular and developmental evolution, 2015-09, Vol.324 (6), p.504-516

2015

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Seven rules for simulations in paleobiology

Paleobiology, 2020-11, Vol.46 (4), p.435-444

2020

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Assessing the Adequacy of Morphological Models using Posterior Predictive Simulations

Systematic biology, 2024-10

2024

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Modo-UG, a marsupial nonclassical MHC class I locus

Immunogenetics (New York), 2006-06, Vol.58 (5-6), p.396-406

2006

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Analysis of a marsupial MHC region containing two recently duplicated class I loci

Mammalian genome, 2004-10, Vol.15 (10), p.851-864

2004

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Genomic data support the taxonomic validity of Middle American livebearers Poeciliopsis gracilis and Poeciliopsis pleurospilus (Cyprinodontiformes: Poeciliidae)

PloS one, 2022-01, Vol.17 (1)

2022

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Bayesian Analysis Using a Simple Likelihood Model Outperforms Parsimony for Estimation of Phylogeny from Discrete Morphological Data: e109210

PloS one, 2014-10, Vol.9 (10)

2014

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Bayesian analysis using a simple likelihood model outperforms parsimony for estimation of phylogeny from discrete morphological data

Genomic data support the taxonomic validity of Middle American livebearers Poeciliopsis gracilis and Poeciliopsis pleurospilus (Cyprinodontiformes: Poeciliidae)

From panic to pedagogy: Using online active learning to promote inclusive instruction in ecology and evolutionary biology courses and beyond

PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses

Long-branch attraction and the phylogeny of true water bugs (Hemiptera: Nepomorpha) as estimated from mitochondrial genomes

Species delimitation in endangered groundwater salamanders: Implications for aquifer management and biodiversity conservation

Modeling Character Change Heterogeneity in Phylogenetic Analyses of Morphology through the Use of Priors

The why, when, and how of computing in biology classrooms [version 1; peer review: 2 approved]

Integrating Fossil Observations Into Phylogenetics Using the Fossilized Birth–Death Model

A Systematist’s Guide to Estimating Bayesian Phylogenies From Morphological Data

The Fundamental Role of Character Coding in Bayesian Morphological Phylogenetics

Editor's note on ‘Putting fossils in trees’ special issue

Bayesian analyses in phylogenetic palaeontology: interpreting the posterior sample

Handling Logical Character Dependency in Phylogenetic Inference: Extensive Performance Testing of Assumptions and Solutions Using Simulated and Empirical Data

Shared Escovopsis parasites between leaf-cutting and non-leaf-cutting ants in the higher attine fungus-growing ant symbiosis

Phylogenetic patterns of ant–fungus associations indicate that farming strategies, not only a superior fungal cultivar, explain the ecological success of leafcutter ants

Revticulate: An R framework for interaction with RevBayes

The why, when, and how of computing in biology classrooms [version 2; peer review: 2 approved]

Which came first: The lizard or the egg? Robustness in phylogenetic reconstruction of ancestral states

Seven rules for simulations in paleobiology

Assessing the Adequacy of Morphological Models using Posterior Predictive Simulations

Modo-UG, a marsupial nonclassical MHC class I locus

Analysis of a marsupial MHC region containing two recently duplicated class I loci

Genomic data support the taxonomic validity of Middle American livebearers Poeciliopsis gracilis and Poeciliopsis pleurospilus (Cyprinodontiformes: Poeciliidae)

Bayesian Analysis Using a Simple Likelihood Model Outperforms Parsimony for Estimation of Phylogeny from Discrete Morphological Data: e109210

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