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Decoding the regulatory network of early blood development from single-cell gene expression measurements

Nature biotechnology, 2015-03, Vol.33 (3), p.269-276

2015

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BTR: training asynchronous Boolean models using single-cell expression data

BMC bioinformatics, 2016-09, Vol.17 (1), p.355-355, Article 355

2016

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Mapping Rora expression in resting and activated CD4+ T cells

PloS one, 2021-05, Vol.16 (5), p.e0251233-e0251233

2021

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Single-cell multiomics dissection of basal and antigen-specific activation states of CD19-targeted CAR T cells

Journal for immunotherapy of cancer, 2021-05, Vol.9 (5), p.e002328

2021

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Transcriptional hierarchies regulating early blood cell development

Blood cells, molecules, & diseases, 2013-12, Vol.51 (4), p.239-247

2013

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SCNS: a graphical tool for reconstructing executable regulatory networks from single-cell genomic data

BMC systems biology, 2018-05, Vol.12 (1), p.59-59, Article 59

2018

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Abstract PO-015: Ex-vivo stimulation of chimeric antigen receptor T cell pre-infusion products predicts clinical response in pediatric B cell acute lymphoblastic leukemia

Cancer research (Chicago, Ill.), 2020-11, Vol.80 (21_Supplement), p.PO-015-PO-015

2020

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Abstract PO-078: Single-cell transcriptomic analysis of highly-multiplexed IHC images via antigen mapping

Cancer research (Chicago, Ill.), 2020-11, Vol.80 (21_Supplement), p.PO-078-PO-078

2020

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Program synthesis meets deep learning for decoding regulatory networks

Current opinion in systems biology, 2017-08, Vol.4, p.64-70

2017

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Processing, visualising and reconstructing network models from single‐cell data

Immunology and cell biology, 2016-03, Vol.94 (3), p.256-265

2016

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Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation

Genome Biology, 2016-05, Vol.17 (1), p.103, Article 103

2016

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Developmental trajectories of thalamic progenitors revealed by single-cell transcriptome profiling and Shh perturbation

Cell reports (Cambridge), 2022-12, Vol.41 (10), p.111768-111768, Article 111768

2022

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Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Science advances, 2022-06, Vol.8 (23), p.eabj2820-eabj2820

2022

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Single-cell transcriptomic analysis of mIHC images via antigen mapping

Science advances, 2021-03, Vol.7 (10)

2021

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Single-cell analyses of regulatory network perturbations using enhancer-targeting TALEs suggest novel roles for PU.1 during haematopoietic specification

Development (Cambridge), 2014-10, Vol.141 (20), p.4018-4030

2014

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Building an ENCODE-style data compendium on a shoestring

Nature methods, 2013-10, Vol.10 (10), p.926-926

2013

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Decoding the Regulatory Network for Blood Development from Single-Cell Gene Expression Measurements

Nature biotechnology, 2015-02, Vol.33 (3), p.269-276

2015

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Erratum to: Single cell analysis of CD4+ T cell differentiation reveals three major cell states and progressive acceleration of proliferation

Genome Biology, 2016-06, Vol.17 (1), p.133-133, Article 133

2016

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Decoding the transcriptional program for blood development from whole tissue single-cell gene expression measurements

Experimental hematology, 2014-08, Vol.42 (8), p.S52-S52

2014

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Using State Space Exploration to Determine How Gene Regulatory Networks Constrain Mutation Order in Cancer Evolution

Automated Reasoning for Systems Biology and Medicine, p.133-153

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Synthesising Executable Gene Regulatory Networks from Single-Cell Gene Expression Data

Computer Aided Verification, p.544-560

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An ISMS (Im)-Maturity Capability Model

2008 IEEE 8th International Conference on Computer and Information Technology Workshops, 2008, p.242-247

Woodhouse, S.

2008

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Information Security: End User Behavior and Corporate Culture

7th IEEE International Conference on Computer and Information Technology (CIT 2007), 2007, p.767-774

Woodhouse, S.

2007

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The importance of feldspar for ice nucleation by mineral dust in mixed-phase clouds

Nature (London), 2013-06, Vol.498 (7454), p.355-358

2013

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North American monsoon precipitation reconstructed from tree-ring latewood

Geophysical research letters, 2013-03, Vol.40 (5), p.954-958

2013

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Decoding the regulatory network of early blood development from single-cell gene expression measurements

BTR: training asynchronous Boolean models using single-cell expression data

Mapping Rora expression in resting and activated CD4+ T cells

Single-cell multiomics dissection of basal and antigen-specific activation states of CD19-targeted CAR T cells

Transcriptional hierarchies regulating early blood cell development

SCNS: a graphical tool for reconstructing executable regulatory networks from single-cell genomic data

Abstract PO-015: Ex-vivo stimulation of chimeric antigen receptor T cell pre-infusion products predicts clinical response in pediatric B cell acute lymphoblastic leukemia

Abstract PO-078: Single-cell transcriptomic analysis of highly-multiplexed IHC images via antigen mapping

Program synthesis meets deep learning for decoding regulatory networks

Processing, visualising and reconstructing network models from single‐cell data

Single-cell analysis of CD4+ T-cell differentiation reveals three major cell states and progressive acceleration of proliferation

Developmental trajectories of thalamic progenitors revealed by single-cell transcriptome profiling and Shh perturbation

Single-cell antigen-specific landscape of CAR T infusion product identifies determinants of CD19-positive relapse in patients with ALL

Single-cell transcriptomic analysis of mIHC images via antigen mapping

Single-cell analyses of regulatory network perturbations using enhancer-targeting TALEs suggest novel roles for PU.1 during haematopoietic specification

Building an ENCODE-style data compendium on a shoestring

Decoding the Regulatory Network for Blood Development from Single-Cell Gene Expression Measurements

Erratum to: Single cell analysis of CD4+ T cell differentiation reveals three major cell states and progressive acceleration of proliferation

Decoding the transcriptional program for blood development from whole tissue single-cell gene expression measurements

Using State Space Exploration to Determine How Gene Regulatory Networks Constrain Mutation Order in Cancer Evolution

Synthesising Executable Gene Regulatory Networks from Single-Cell Gene Expression Data

An ISMS (Im)-Maturity Capability Model

Information Security: End User Behavior and Corporate Culture

The importance of feldspar for ice nucleation by mineral dust in mixed-phase clouds

North American monsoon precipitation reconstructed from tree-ring latewood

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