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Generalizing RNA velocity to transient cell states through dynamical modeling

Nature biotechnology, 2020-12, Vol.38 (12), p.1408-1414

2020

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Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics

Science (American Association for the Advancement of Science), 2018-05, Vol.360 (6391)

2018

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SCANPY: large-scale single-cell gene expression data analysis

Genome Biology, 2018-02, Vol.19 (1), p.15-15, Article 15

2018

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PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells

Genome Biology, 2019-03, Vol.20 (1), p.59-9, Article 59

2019

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scGen predicts single-cell perturbation responses

Nature methods, 2019-08, Vol.16 (8), p.715-721

2019

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Diffusion pseudotime robustly reconstructs lineage branching

Nature methods, 2016-10, Vol.13 (10), p.845-848

2016

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Conditional out-of-distribution generation for unpaired data using transfer VAE

Bioinformatics, 2020-12, Vol.36 (Supplement_2), p.i610-i617

2020

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A test metric for assessing single-cell RNA-seq batch correction

Nature methods, 2019-01, Vol.16 (1), p.43-49

2019

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Feature Detection for Vehicle Localization in Urban Environments Using a Multilayer LIDAR

IEEE transactions on intelligent transportation systems, 2016-02, Vol.17 (2), p.420-429

2016

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Reconstructing cell cycle and disease progression using deep learning

Nature communications, 2017-09, Vol.8 (1), p.463-6, Article 463

2017

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The prognostic importance of MRI detected extramural vascular invasion (mrEMVI) in locally advanced rectal cancer

International journal of colorectal disease, 2020-10, Vol.35 (10), p.1849-1854

2020

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How to discretize a quantum bath for real-time evolution

Physical review. B, Condensed matter and materials physics, 2015-10, Vol.92 (15), Article 155126

2015

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Imaginary-Time Matrix Product State Impurity Solver for Dynamical Mean-Field Theory

Physical review. X, 2015-11, Vol.5 (4), p.041032, Article 041032

2015

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Influence of the wettability on the residual fluid saturation for homogeneous and heterogeneous porous systems

Physics of fluids (1994), 2020-05, Vol.32 (5)

2020

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Chebyshev matrix product state impurity solver for dynamical mean-field theory

Physical review. B, Condensed matter and materials physics, 2014-09, Vol.90 (11), Article 115124

2014

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Machine learning for perturbational single-cell omics

Cell systems, 2021-06, Vol.12 (6), p.522-537

2021

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Induction of brain‐infiltrating T‐bet–expressing B cells in multiple sclerosis

Annals of neurology, 2019-08, Vol.86 (2), p.264-278

2019

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Thrombogenicity assessment of Pipeline Flex, Pipeline Shield, and FRED flow diverters in an in vitro human blood physiological flow loop model

Journal of biomedical materials research. Part A, 2018-12, Vol.106 (12), p.3195-3202

2018

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Predicting cellular responses to complex perturbations in high‐throughput screens

Molecular systems biology, 2023-06, Vol.19 (6), p.e11517-n/a

2023

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The association of Epstein‐Barr virus infection with CXCR3+ B‐cell development in multiple sclerosis: impact of immunotherapies

European journal of immunology, 2021-03, Vol.51 (3), p.626-633

2021

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Atomic Layer Deposition of Al2O3 on WSe2 Functionalized by Titanyl Phthalocyanine

ACS nano, 2016-07, Vol.10 (7), p.6888-6896

2016

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Differential Runx3, Eomes, and T‐bet expression subdivides MS‐associated CD4+ T cells with brain‐homing capacity

European journal of immunology, 2024-02, Vol.54 (2), p.e2350544-n/a

2024

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Poly(lactide)-block-Poly(HEMA) Block Copolymers: An Orthogonal One-Pot Combination of ROP and ATRP, Using a Bifunctional Initiator

Macromolecules, 2009-08, Vol.42 (15), p.5622-5628

2009

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Improved Performance in Mammalian Cell Perfusion Cultures by Growth Inhibition

Biotechnology journal, 2019-02, Vol.14 (2), p.e1700722-n/a

2019

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Using a worldwide in-app survey to explore sugammadex usage patterns: a prospective observational study

British journal of anaesthesia : BJA, 2017-08, Vol.119 (2), p.333-335

2017

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Generalizing RNA velocity to transient cell states through dynamical modeling

Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics

SCANPY: large-scale single-cell gene expression data analysis

PAGA: graph abstraction reconciles clustering with trajectory inference through a topology preserving map of single cells

scGen predicts single-cell perturbation responses

Diffusion pseudotime robustly reconstructs lineage branching

Conditional out-of-distribution generation for unpaired data using transfer VAE

A test metric for assessing single-cell RNA-seq batch correction

Feature Detection for Vehicle Localization in Urban Environments Using a Multilayer LIDAR

Reconstructing cell cycle and disease progression using deep learning

The prognostic importance of MRI detected extramural vascular invasion (mrEMVI) in locally advanced rectal cancer

How to discretize a quantum bath for real-time evolution

Imaginary-Time Matrix Product State Impurity Solver for Dynamical Mean-Field Theory

Influence of the wettability on the residual fluid saturation for homogeneous and heterogeneous porous systems

Chebyshev matrix product state impurity solver for dynamical mean-field theory

Machine learning for perturbational single-cell omics

Induction of brain‐infiltrating T‐bet–expressing B cells in multiple sclerosis

Thrombogenicity assessment of Pipeline Flex, Pipeline Shield, and FRED flow diverters in an in vitro human blood physiological flow loop model

Predicting cellular responses to complex perturbations in high‐throughput screens

The association of Epstein‐Barr virus infection with CXCR3+ B‐cell development in multiple sclerosis: impact of immunotherapies

Atomic Layer Deposition of Al2O3 on WSe2 Functionalized by Titanyl Phthalocyanine

Differential Runx3, Eomes, and T‐bet expression subdivides MS‐associated CD4+ T cells with brain‐homing capacity

Poly(lactide)-block-Poly(HEMA) Block Copolymers: An Orthogonal One-Pot Combination of ROP and ATRP, Using a Bifunctional Initiator

Improved Performance in Mammalian Cell Perfusion Cultures by Growth Inhibition

Using a worldwide in-app survey to explore sugammadex usage patterns: a prospective observational study

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