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Qtlizer: comprehensive QTL annotation of GWAS results

Scientific reports, 2020-11, Vol.10 (1), p.20417-20417, Article 20417

2020

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A comprehensive analysis of genetic risk for metabolic syndrome in the Egyptian population via allele frequency investigation and Missense3D predictions

Scientific reports, 2023-11, Vol.13 (1), p.20517-20517, Article 20517

2023

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Evidence for a potential role of miR-1908-5p and miR-3614-5p in autoimmune disease risk using integrative bioinformatics

Journal of autoimmunity, 2018-11, Vol.94, p.83-89

2018

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Editorial: Long-read sequencing-Pitfalls, benefits and success stories

Frontiers in genetics, 2023-01, Vol.13, p.1114542-1114542

2023

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CDKN2A deletion in supratentorial ependymoma with RELA alteration indicates a dismal prognosis: a retrospective analysis of the HIT ependymoma trial cohort

Acta neuropathologica, 2020-09, Vol.140 (3), p.405-407

2020

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Sequencing technologies and hardware-accelerated parallel computing transform computational genomics research

Frontiers in bioinformatics, 2024-03, Vol.4, p.1384497-1384497

2024

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An integrated personal and population-based Egyptian genome reference

Nature communications, 2020-09, Vol.11 (1), p.4719-4719, Article 4719

2020

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Enhanced Glycolysis Is Required for Antileishmanial Functions of Neutrophils Upon Infection With Leishmania donovani

Frontiers in immunology, 2021-03, Vol.12, p.632512-632512

2021

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A survey of genome-wide association studies, polygenic scores and UK Biobank highlights resources for autoimmune disease genetics

Frontiers in immunology, 2022-08, Vol.13, p.972107-972107

2022

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A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

Microbiome, 2023-10, Vol.11 (1), p.1-232, Article 232

2023

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In silico candidate variant and gene identification using inbred mouse strains

PeerJ (San Francisco, CA), 2021-03, Vol.9, p.e11017-e11017, Article e11017

2021

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North and East African mitochondrial genetic variation needs further characterization towards precision medicine

Journal of advanced research, 2023-12, Vol.54, p.59-76

2023

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Genetic analysis of CFH and MCP in Egyptian patients with immune-complex proliferative glomerulonephritis

Frontiers in immunology, 2022-09, Vol.13, p.960068-960068

2022

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Improved risk-stratification for posterior fossa ependymoma of childhood considering clinical, histological and genetic features - a retrospective analysis of the HIT ependymoma trial cohort

Acta neuropathologica communications, 2019-11, Vol.7 (1), p.181-12, Article 181

2019

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Taking genomics research to the next level: The Genotype‐Tissue expression project

Movement disorders, 2018-07, Vol.33 (7), p.1097-1097

2018

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Differential expression of microRNAs in Alzheimer's disease brain, blood, and cerebrospinal fluid

Alzheimer's & dementia, 2019-11, Vol.15 (11), p.1468-1477

2019

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Automatic Classification of Protein Structure Using the Maximum Contact Map Overlap Metric

Algorithms, 2015-12, Vol.8 (4), p.850-869

2015

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Bioconda: sustainable and comprehensive software distribution for the life sciences

Nature methods, 2018-07, Vol.15 (7), p.475

2018

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Alzheimer's disease risk SNPs show no strong effect on miRNA expression in human lymphoblastoid cell lines

Neurobiology of aging, 2020-02, Vol.86, p.202.e1-202.e3

2020

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Whole‐genome sequencing reveals new Alzheimer's disease–associated rare variants in loci related to synaptic function and neuronal development

Alzheimer's & dementia, 2021-09, Vol.17 (9), p.1509-1527

2021

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Meta‐analyses identify differentially expressed microRNAs in Parkinson's disease

Annals of neurology, 2019-06, Vol.85 (6), p.835-851

2019

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Supratentorial ependymomas of childhood carry C11orf95–RELA fusions leading to pathological activation of the NF-κB signaling pathway

Acta neuropathologica, 2014-04, Vol.127 (4), p.609-611

2014

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Recurrent alterations of TNFAIP3 (A20) in T‐cell large granular lymphocytic leukemia

International journal of cancer, 2016-01, Vol.138 (1), p.121-124

2016

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DALIX: Optimal DALI Protein Structure Alignment

IEEE/ACM transactions on computational biology and bioinformatics, 2013-01, Vol.10 (1), p.26-36

2013

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Qtlizer: comprehensive QTL annotation of GWAS results

A comprehensive analysis of genetic risk for metabolic syndrome in the Egyptian population via allele frequency investigation and Missense3D predictions

Evidence for a potential role of miR-1908-5p and miR-3614-5p in autoimmune disease risk using integrative bioinformatics

Editorial: Long-read sequencing-Pitfalls, benefits and success stories

CDKN2A deletion in supratentorial ependymoma with RELA alteration indicates a dismal prognosis: a retrospective analysis of the HIT ependymoma trial cohort

Sequencing technologies and hardware-accelerated parallel computing transform computational genomics research

An integrated personal and population-based Egyptian genome reference

Enhanced Glycolysis Is Required for Antileishmanial Functions of Neutrophils Upon Infection With Leishmania donovani

A survey of genome-wide association studies, polygenic scores and UK Biobank highlights resources for autoimmune disease genetics

A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs

In silico candidate variant and gene identification using inbred mouse strains

North and East African mitochondrial genetic variation needs further characterization towards precision medicine

Genetic analysis of CFH and MCP in Egyptian patients with immune-complex proliferative glomerulonephritis

Elucidating Hexanucleotide Repeat Number and Methylation within the X-Linked Dystonia-Parkinsonism (XDP)-Related SVA Retrotransposon in TAF1 with Nanopore Sequencing

Improved risk-stratification for posterior fossa ependymoma of childhood considering clinical, histological and genetic features - a retrospective analysis of the HIT ependymoma trial cohort

Taking genomics research to the next level: The Genotype‐Tissue expression project

Differential expression of microRNAs in Alzheimer's disease brain, blood, and cerebrospinal fluid

Automatic Classification of Protein Structure Using the Maximum Contact Map Overlap Metric

Bioconda: sustainable and comprehensive software distribution for the life sciences

Alzheimer's disease risk SNPs show no strong effect on miRNA expression in human lymphoblastoid cell lines

Whole‐genome sequencing reveals new Alzheimer's disease–associated rare variants in loci related to synaptic function and neuronal development

Meta‐analyses identify differentially expressed microRNAs in Parkinson's disease

Supratentorial ependymomas of childhood carry C11orf95–RELA fusions leading to pathological activation of the NF-κB signaling pathway

Recurrent alterations of TNFAIP3 (A20) in T‐cell large granular lymphocytic leukemia

DALIX: Optimal DALI Protein Structure Alignment

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