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Highly precise measurement of HIV DNA by droplet digital PCR

PloS one, 2013-04, Vol.8 (4), p.e55943-e55943

2013

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Modulating gut microbiota to treat cancer

Science (American Association for the Advancement of Science), 2021-02, Vol.371 (6529), p.573-574

2021

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Altered Epithelial Gene Expression in Peripheral Airways of Severe Asthma

PloS one, 2017-01, Vol.12 (1), p.e0168680-e0168680

2017

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A deep learning genome-mining strategy for biosynthetic gene cluster prediction

Nucleic acids research, 2019-10, Vol.47 (18), p.e110-e110

2019

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Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology

International journal of molecular sciences, 2017-02, Vol.18 (2), p.312-312

2017

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Long non-coding RNAs and latent HIV - A search for novel targets for latency reversal

PloS one, 2019-11, Vol.14 (11), p.e0224879

2019

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Gene networks specific for innate immunity define post-traumatic stress disorder

Molecular psychiatry, 2015-12, Vol.20 (12), p.1538-1545

2015

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GARD: a genetic algorithm for recombination detection

Bioinformatics, 2006-12, Vol.22 (24), p.3096-3098

2006

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Automated phylogenetic detection of recombination using a genetic algorithm

Molecular biology and evolution, 2006-10, Vol.23 (10), p.1891-1901

2006

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PTSD Blood Transcriptome Mega-Analysis: Shared Inflammatory Pathways across Biological Sex and Modes of Trauma

Neuropsychopharmacology (New York, N.Y.), 2018-02, Vol.43 (3), p.469-481

2018

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An evaluation of different classification algorithms for protein sequence-based reverse vaccinology prediction

PloS one, 2019-12, Vol.14 (12), p.e0226256-e0226256

2019

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The application potential of machine learning and genomics for understanding natural product diversity, chemistry, and therapeutic translatability

Natural product reports, 2021-06, Vol.38 (6), p.11-118

2021

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Multitissue Transcriptomics Delineates the Diversity of Airway T Cell Functions in Asthma

American journal of respiratory cell and molecular biology, 2018-02, Vol.58 (2), p.261-270

2018

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Gene Expression Signatures in Tuberculosis Have Greater Overlap with Autoimmune Diseases Than with Infectious Diseases

American journal of respiratory and critical care medicine, 2017-09, Vol.196 (5), p.655-656

2017

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Gene expression analysis of TIL rich HPV-driven head and neck tumors reveals a distinct B-cell signature when compared to HPV independent tumors

Oncotarget, 2016-08, Vol.7 (35), p.56781-56797

2016

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Transcriptomic Analysis Implicates the p53 Signaling Pathway in the Establishment of HIV-1 Latency in Central Memory CD4 T Cells in an In Vitro Model

PLoS pathogens, 2016-11, Vol.12 (11), p.e1006026-e1006026

2016

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Upregulated Glucose Metabolism Correlates Inversely with CD8+ T-cell Infiltration and Survival in Squamous Cell Carcinoma

Cancer research (Chicago, Ill.), 2016-07, Vol.76 (14), p.4136-4148

2016

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An in-depth comparison of latent HIV-1 reactivation in multiple cell model systems and resting CD4+ T cells from aviremic patients

PLoS pathogens, 2013-12, Vol.9 (12), p.e1003834-e1003834

2013

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TRAF6 and IRF7 control HIV replication in macrophages

PloS one, 2011-11, Vol.6 (11), p.e28125

2011

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HPV, tumour metabolism and novel target identification in head and neck squamous cell carcinoma

British journal of cancer, 2019-02, Vol.120 (3), p.356-367

2019

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Gender-dependent differences in plasma matrix metalloproteinase-8 elevated in pulmonary tuberculosis

PloS one, 2015-01, Vol.10 (1), p.e0117605-e0117605

2015

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Genomic programming of IRF4-expressing human Langerhans cells

Nature communications, 2020-01, Vol.11 (1), p.313-313, Article 313

2020

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Micro RNA Targets in HIV Latency: Insights into Novel Layers of Latency Control

AIDS research and human retroviruses, 2021-02, Vol.37 (2), p.109-121

2021

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Head and Neck Squamous Cell Carcinomas Are Characterized by a Stable Immune Signature Within the Primary Tumor Over Time and Space

Clinical cancer research, 2017-12, Vol.23 (24), p.7641-7649

2017

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The effect of cell subset isolation method on gene expression in leukocytes

Cytometry. Part A, 2014-01, Vol.85 (1), p.94-104

2014

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Highly precise measurement of HIV DNA by droplet digital PCR

Modulating gut microbiota to treat cancer

Altered Epithelial Gene Expression in Peripheral Airways of Severe Asthma

A deep learning genome-mining strategy for biosynthetic gene cluster prediction

Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology

Long non-coding RNAs and latent HIV - A search for novel targets for latency reversal

Gene networks specific for innate immunity define post-traumatic stress disorder

GARD: a genetic algorithm for recombination detection

Automated phylogenetic detection of recombination using a genetic algorithm

PTSD Blood Transcriptome Mega-Analysis: Shared Inflammatory Pathways across Biological Sex and Modes of Trauma

An evaluation of different classification algorithms for protein sequence-based reverse vaccinology prediction

The application potential of machine learning and genomics for understanding natural product diversity, chemistry, and therapeutic translatability

Multitissue Transcriptomics Delineates the Diversity of Airway T Cell Functions in Asthma

Gene Expression Signatures in Tuberculosis Have Greater Overlap with Autoimmune Diseases Than with Infectious Diseases

Gene expression analysis of TIL rich HPV-driven head and neck tumors reveals a distinct B-cell signature when compared to HPV independent tumors

Transcriptomic Analysis Implicates the p53 Signaling Pathway in the Establishment of HIV-1 Latency in Central Memory CD4 T Cells in an In Vitro Model

Upregulated Glucose Metabolism Correlates Inversely with CD8+ T-cell Infiltration and Survival in Squamous Cell Carcinoma

An in-depth comparison of latent HIV-1 reactivation in multiple cell model systems and resting CD4+ T cells from aviremic patients

TRAF6 and IRF7 control HIV replication in macrophages

HPV, tumour metabolism and novel target identification in head and neck squamous cell carcinoma

Gender-dependent differences in plasma matrix metalloproteinase-8 elevated in pulmonary tuberculosis

Genomic programming of IRF4-expressing human Langerhans cells

Micro RNA Targets in HIV Latency: Insights into Novel Layers of Latency Control

Head and Neck Squamous Cell Carcinomas Are Characterized by a Stable Immune Signature Within the Primary Tumor Over Time and Space

The effect of cell subset isolation method on gene expression in leukocytes

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