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Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species

PLoS biology, 2017-11, Vol.15 (11), p.e2003583-e2003583

2017

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The evolution of fungal metabolic pathways

PLoS genetics, 2014-12, Vol.10 (12), p.e1004816

2014

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The birth, evolution and death of metabolic gene clusters in fungi

Nature reviews. Microbiology, 2018-12, Vol.16 (12), p.731-744

2018

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Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata

BMC genomics, 2010-06, Vol.11 (1), p.366-366

2010

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Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum

Cell, 2018-11, Vol.175 (6), p.1533-1545.e20

2018

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Fungal metabolic gene clusters-caravans traveling across genomes and environments

Frontiers in microbiology, 2015, Vol.6, p.161-161

2015

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A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

The Plant cell, 2017-05, Vol.29 (5), p.944-959

2017

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Examining the evolution of the regulatory circuit controlling secondary metabolism and development in the fungal genus Aspergillus

PLoS genetics, 2015-03, Vol.11 (3), p.e1005096-e1005096

2015

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Dinoflagellate Genome Evolution

Annual review of microbiology, 2011-01, Vol.65 (1), p.369-387

2011

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Horizontally acquired genes in early-diverging pathogenic fungi enable the use of host nucleosides and nucleotides

Proceedings of the National Academy of Sciences - PNAS, 2016-04, Vol.113 (15), p.4116-4121

2016

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Conservation and diversification of HAIRY MERISTEM gene family in land plants

The Plant journal : for cell and molecular biology, 2021-04, Vol.106 (2), p.366-378

2021

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Evolution of saxitoxin synthesis in cyanobacteria and dinoflagellates

Molecular biology and evolution, 2013-01, Vol.30 (1), p.70-78

2013

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Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Gigascience, 2019-01, Vol.8 (3)

2019

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Dynamic Evolution of Nitric Oxide Detoxifying Flavohemoglobins, a Family of Single-Protein Metabolic Modules in Bacteria and Eukaryotes

Molecular biology and evolution, 2016-08, Vol.33 (8), p.1979-1987

2016

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Reference Genome for the Highly Transformable Setaria viridis ME034V

G3 : genes - genomes - genetics, 2020-10, Vol.10 (10), p.3467-3478

2020

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Behavioural differences underlie toxicity and predation variation in blooms of Prymnesium parvum

Ecology letters, 2023-05, Vol.26 (5), p.677-691

2023

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Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage

eLife, 2018-04, Vol.7

2018

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Extreme genome diversity and cryptic speciation in a harmful algal-bloom-forming eukaryote

Current biology, 2023-06, Vol.33 (11), p.2246-2259.e8

2023

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Giant polyketide synthase enzymes in the biosynthesis of giant marine polyether toxins

Science (American Association for the Advancement of Science), 2024-08, Vol.385 (6709), p.671-678

2024

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Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Gigascience, 2019-03, Vol.8 (3)

2019

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Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management

Proceedings of the National Academy of Sciences - PNAS, 2023-07, Vol.120 (30), p.e2305495120-e2305495120

2023

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Horizontal Transfer of Bacterial Cytolethal Distending Toxin B Genes to Insects

Molecular biology and evolution, 2019-10, Vol.36 (10), p.2105-2110

2019

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CHD Chromatin Remodeling Protein Diversification Yields Novel Clades and Domains Absent in Classic Model Organisms

Genome biology and evolution, 2022-05, Vol.14 (5)

2022

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A De Novo Transcriptome Assembly of Ceratopteris richardii Provides Insights into the Evolutionary Dynamics of Complex Gene Families in Land Plants

Genome biology and evolution, 2021-03, Vol.13 (3)

2021

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The impact of automated filtering of BLAST-determined homologs in the phylogenetic detection of horizontal gene transfer from a transcriptome assembly

Molecular phylogenetics and evolution, 2014-02, Vol.71, p.184-192

2014

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Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species

The evolution of fungal metabolic pathways

The birth, evolution and death of metabolic gene clusters in fungi

Transcriptome analysis reveals nuclear-encoded proteins for the maintenance of temporary plastids in the dinoflagellate Dinophysis acuminata

Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum

Fungal metabolic gene clusters-caravans traveling across genomes and environments

A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

Examining the evolution of the regulatory circuit controlling secondary metabolism and development in the fungal genus Aspergillus

Dinoflagellate Genome Evolution

Horizontally acquired genes in early-diverging pathogenic fungi enable the use of host nucleosides and nucleotides

Conservation and diversification of HAIRY MERISTEM gene family in land plants

Evolution of saxitoxin synthesis in cyanobacteria and dinoflagellates

Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Dynamic Evolution of Nitric Oxide Detoxifying Flavohemoglobins, a Family of Single-Protein Metabolic Modules in Bacteria and Eukaryotes

Reference Genome for the Highly Transformable Setaria viridis ME034V

Behavioural differences underlie toxicity and predation variation in blooms of Prymnesium parvum

Evidence for loss and reacquisition of alcoholic fermentation in a fructophilic yeast lineage

Extreme genome diversity and cryptic speciation in a harmful algal-bloom-forming eukaryote

Giant polyketide synthase enzymes in the biosynthesis of giant marine polyether toxins

Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Pumping iron: A multi-omics analysis of two extremophilic algae reveals iron economy management

Horizontal Transfer of Bacterial Cytolethal Distending Toxin B Genes to Insects

CHD Chromatin Remodeling Protein Diversification Yields Novel Clades and Domains Absent in Classic Model Organisms

A De Novo Transcriptome Assembly of Ceratopteris richardii Provides Insights into the Evolutionary Dynamics of Complex Gene Families in Land Plants

The impact of automated filtering of BLAST-determined homologs in the phylogenetic detection of horizontal gene transfer from a transcriptome assembly

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