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RnaPredict-An Evolutionary Algorithm for RNA Secondary Structure Prediction

IEEE/ACM transactions on computational biology and bioinformatics, 2008-01, Vol.5 (1), p.25-41

2008

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The significance of thermodynamic models in the accuracy improvement of RNA secondary structure prediction using permutation-based simulated annealing

2007 IEEE Congress on Evolutionary Computation, 2007, p.3879-3885

2007

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RNA pseudoknot prediction via an evolutionary algorithm

2009 IEEE Congress on Evolutionary Computation, 2009, p.270-276

2009

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Impact of an enhanced thermodynamic model on RnaPredict, an evolutionary algorithm for RNA secondary structure prediction

2009 IEEE Congress on Evolutionary Computation, 2009, p.2892-2899

2009

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jViz.Rna - An Interactive Graphical Tool for Visualizing RNA Secondary Structure Including Pseudoknots

19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06), 2006, p.659-664

2006

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Graph Drawing Tools for Bioinformatics Research: An Overview

19th IEEE Symposium on Computer-Based Medical Systems (CBMS'06), 2006, p.653-658

2006

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A Detailed Analysis of Parallel Speedup in P-RnaPredict - An Evolutionary Algorithm for RNA Secondary Structure Prediction

2006 IEEE International Conference on Evolutionary Computation, 2006, p.2323-2330

2006

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Algorithms for RNA folding: a comparison of dynamic programming and parallel evolutionary algorithms

2005 IEEE Congress on Evolutionary Computation, 2005, Vol.1, p.475-483 Vol.1

2005

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Significance of randomness in P-RnaPredict - a parallel evolutionary algorithm for RNA folding

2005 IEEE Congress on Evolutionary Computation, 2005, Vol.1, p.467-474 Vol.1

2005

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SARNA-Predict-pk: Predicting RNA secondary structures including pseudoknots

2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2008, p.1-8

2008

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SARNA-ensemble-predict: The effect of different dissimilarity metrics on a novel ensemble-based RNA secondary structure prediction algorithm

2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2009, p.8-15

2009

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Performance prediction for RNA design using parametric and non-parametric regression models

2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2009, p.16-23

2009

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A hybrid clustering/evolutionary algorithm for RNA folding

2008 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2008, p.15-21

2008

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rnaDesign: Local search for RNA secondary structure design

2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2009, p.1-7

2009

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jViz.Rna -a java tool for RNA secondary structure visualization

IEEE transactions on nanobioscience, 2005-09, Vol.4 (3), p.212-218

2005

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Special Section on Bioinformatics and Computational Biology

IEEE transactions on nanobioscience, 2005-09, Vol.4 (3), p.205-206

2005

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Using stacking-energies (INN and INN-HB) for improving the accuracy of RNA secondary structure prediction with an evolutionary algorithm - a comparison to known structures

Proceedings of the 2004 Congress on Evolutionary Computation (IEEE Cat. No.04TH8753), 2004, Vol.1, p.598-606 Vol.1

2004

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Improved covariance model parameter estimation using RNA thermodynamic properties

2007 2nd Bio-Inspired Models of Network, Information and Computing Systems, 2007, p.185-191

2007

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P-RnaPredict-a parallel evolutionary algorithm for RNA folding: effects of pseudorandom number quality

IEEE transactions on nanobioscience, 2005-09, Vol.4 (3), p.219-227

2005

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Analysis of Thermodynamic Models and Performance in RnaPredict - An Evolutionary Algorithm for RNA Folding

2006 IEEE Symposium on Computational Intelligence and Bioinformatics and Computational Biology, 2006, p.1-9

2006

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Exploring the use of stem-loop characteristics for pinpointing structural RNA genes

Proceedings. 2004 IEEE Computational Systems Bioinformatics Conference, 2004. CSB 2004, 2004, p.533-534

2004

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Permutation-based RNA secondary structure prediction via a genetic algorithm

The 2003 Congress on Evolutionary Computation, 2003. CEC '03, 2003, Vol.1, p.335-342 Vol.1

2003

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Comparison of dynamic programming and evolutionary algorithms for RNA secondary structure prediction

2004 Symposium on Computational Intelligence in Bioinformatics and Computational Biology, 2004, p.214-222

2004

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Society Briefs - Bioinformatics and Bioengineering Technical Committee

IEEE computational intelligence magazine, 2007-05, Vol.2 (2), p.72-73

Wiese, Kay

2007

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IEEE/CIS Tour de China [Family Corner]

IEEE computational intelligence magazine, 2006-11, Vol.1 (4), p.15-17

Wiese, Kay

2006

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RnaPredict-An Evolutionary Algorithm for RNA Secondary Structure Prediction

The significance of thermodynamic models in the accuracy improvement of RNA secondary structure prediction using permutation-based simulated annealing

RNA pseudoknot prediction via an evolutionary algorithm

Impact of an enhanced thermodynamic model on RnaPredict, an evolutionary algorithm for RNA secondary structure prediction

jViz.Rna - An Interactive Graphical Tool for Visualizing RNA Secondary Structure Including Pseudoknots

Graph Drawing Tools for Bioinformatics Research: An Overview

A Detailed Analysis of Parallel Speedup in P-RnaPredict - An Evolutionary Algorithm for RNA Secondary Structure Prediction

Algorithms for RNA folding: a comparison of dynamic programming and parallel evolutionary algorithms

Significance of randomness in P-RnaPredict - a parallel evolutionary algorithm for RNA folding

SARNA-Predict-pk: Predicting RNA secondary structures including pseudoknots

SARNA-ensemble-predict: The effect of different dissimilarity metrics on a novel ensemble-based RNA secondary structure prediction algorithm

Performance prediction for RNA design using parametric and non-parametric regression models

A hybrid clustering/evolutionary algorithm for RNA folding

rnaDesign: Local search for RNA secondary structure design

jViz.Rna -a java tool for RNA secondary structure visualization

Special Section on Bioinformatics and Computational Biology

Using stacking-energies (INN and INN-HB) for improving the accuracy of RNA secondary structure prediction with an evolutionary algorithm - a comparison to known structures

Improved covariance model parameter estimation using RNA thermodynamic properties

P-RnaPredict-a parallel evolutionary algorithm for RNA folding: effects of pseudorandom number quality

Analysis of Thermodynamic Models and Performance in RnaPredict - An Evolutionary Algorithm for RNA Folding

Exploring the use of stem-loop characteristics for pinpointing structural RNA genes

Permutation-based RNA secondary structure prediction via a genetic algorithm

Comparison of dynamic programming and evolutionary algorithms for RNA secondary structure prediction

Society Briefs - Bioinformatics and Bioengineering Technical Committee

IEEE/CIS Tour de China [Family Corner]

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