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Screening and validation of lncRNAs and circRNAs as miRNA sponges

Briefings in bioinformatics, 2017-09, Vol.18 (5), p.780-788

2017

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RNAEditor: easy detection of RNA editing events and the introduction of editing islands

Briefings in bioinformatics, 2017-11, Vol.18 (6), p.993-1001

2017

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Long Non-coding RNAs in Endothelial Biology

Frontiers in physiology, 2018-05, Vol.9, p.522-522

2018

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Administration of cardiac mesenchymal cells modulates innate immunity in the acute phase of myocardial infarction in mice

Scientific reports, 2020-09, Vol.10 (1), p.14754-14754, Article 14754

2020

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Airn Regulates Igf2bp2 Translation in Cardiomyocytes

Circulation research, 2018-05, Vol.122 (10), p.1347-1353

2018

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The identification and characterization of novel transcripts from RNA-seq data

Briefings in bioinformatics, 2016-07, Vol.17 (4), p.678-685

2016

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A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1

Journal of molecular cell biology, 2018-04, Vol.10 (2), p.102-117

2018

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ANGIOGENES: knowledge database for protein-coding and noncoding RNA genes in endothelial cells

Scientific reports, 2016-09, Vol.6 (1), p.32475-32475, Article 32475

2016

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Increasing workflow development speed and reproducibility with Vectools [version 2; peer review: 2 approved]

F1000 research, 2018, Vol.7, p.1499

2018

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The Genome of a Thermo Tolerant, Pathogenic Albino Aspergillus fumigatus

Frontiers in microbiology, 2018-08, Vol.9, p.1827-1827

2018

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Genome Sequences of the Lignin-Degrading Pseudomonas sp. Strain YS-1p and Rhizobium sp. Strain YS-1r Isolated from Decaying Wood

Genome announcements (Washington, DC), 2015-03, Vol.3 (2)

2015

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C-It-Loci: a knowledge database for tissue-enriched loci

Bioinformatics, 2015-11, Vol.31 (21), p.3537-3543

2015

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Predicting genome-scale Arabidopsis-Pseudomonas syringae interactome using domain and interolog-based approaches

BMC bioinformatics, 2014-10, Vol.15 Suppl 11 (Suppl 11), p.S13-S13, Article S13

2014

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The A-to-I RNA Editing Enzyme Adar1 Is Essential for Normal Embryonic Cardiac Growth and Development

Circulation research, 2020-07, Vol.127 (4), p.550-552

2020

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Long Noncoding RNA TYKRIL Plays a Role in Pulmonary Hypertension via the p53-mediated Regulation of PDGFRβ

American journal of respiratory and critical care medicine, 2020-11, Vol.202 (10), p.1445-1457

2020

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Resolving the problem of multiple accessions of the same transcript deposited across various public databases

Briefings in bioinformatics, 2017-03, Vol.18 (2), p.226-235

2017

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Logic programming to infer complex RNA expression patterns from RNA-seq data

Briefings in bioinformatics, 2018-03, Vol.19 (2), p.199-209

2018

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Increasing workflow development speed and reproducibility with Vectools

F1000 research, 2018, Vol.7, p.1499-1499

2018

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LacSubPred: predicting subtypes of Laccases, an important lignin metabolism-related enzyme class, using in silico approaches

BMC bioinformatics, 2014-10, Vol.15 Suppl 11 (Suppl 11), p.S15-S15, Article S15

2014

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Cardiac mesenchymal cells from failing and nonfailing hearts limit ventricular dilation when administered late after infarction

American journal of physiology. Heart and circulatory physiology, 2020-07, Vol.319 (1), p.H109-H122

2020

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Identification and characterization of plastid-type proteins from sequence-attributed features using machine learning

BMC bioinformatics, 2013-10, Vol.14 Suppl 14 (S14), p.S7-S7, Article S7

2013

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DRETools: A tool-suite for differential RNA editing detection [version 1; peer review: 1 approved, 1 approved with reservations]

F1000 research, 2018, Vol.7, p.1366

2018

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DRETools: A tool-suite for differential RNA editing detection [version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]

F1000 research, 2018, Vol.7, p.1366

2018

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Investigation of RNA Editing Sites within Bound Regions of RNA-Binding Proteins

High-throughput, 2019-11, Vol.8 (4), p.19

2019

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Cardiac Mesenchymal Cells from Failing and Non-Failing Hearts Limit Ventricular Dilation when Administered Late after Infarction

American journal of physiology. Heart and circulatory physiology, 2020-05

2020

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Screening and validation of lncRNAs and circRNAs as miRNA sponges

RNAEditor: easy detection of RNA editing events and the introduction of editing islands

Long Non-coding RNAs in Endothelial Biology

Administration of cardiac mesenchymal cells modulates innate immunity in the acute phase of myocardial infarction in mice

Airn Regulates Igf2bp2 Translation in Cardiomyocytes

The identification and characterization of novel transcripts from RNA-seq data

A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1

ANGIOGENES: knowledge database for protein-coding and noncoding RNA genes in endothelial cells

Increasing workflow development speed and reproducibility with Vectools [version 2; peer review: 2 approved]

The Genome of a Thermo Tolerant, Pathogenic Albino Aspergillus fumigatus

Genome Sequences of the Lignin-Degrading Pseudomonas sp. Strain YS-1p and Rhizobium sp. Strain YS-1r Isolated from Decaying Wood

C-It-Loci: a knowledge database for tissue-enriched loci

Predicting genome-scale Arabidopsis-Pseudomonas syringae interactome using domain and interolog-based approaches

The A-to-I RNA Editing Enzyme Adar1 Is Essential for Normal Embryonic Cardiac Growth and Development

Long Noncoding RNA TYKRIL Plays a Role in Pulmonary Hypertension via the p53-mediated Regulation of PDGFRβ

Resolving the problem of multiple accessions of the same transcript deposited across various public databases

Logic programming to infer complex RNA expression patterns from RNA-seq data

Increasing workflow development speed and reproducibility with Vectools

LacSubPred: predicting subtypes of Laccases, an important lignin metabolism-related enzyme class, using in silico approaches

Cardiac mesenchymal cells from failing and nonfailing hearts limit ventricular dilation when administered late after infarction

Identification and characterization of plastid-type proteins from sequence-attributed features using machine learning

DRETools: A tool-suite for differential RNA editing detection [version 1; peer review: 1 approved, 1 approved with reservations]

DRETools: A tool-suite for differential RNA editing detection [version 2; peer review: 1 approved, 1 approved with reservations, 1 not approved]

Investigation of RNA Editing Sites within Bound Regions of RNA-Binding Proteins

Cardiac Mesenchymal Cells from Failing and Non-Failing Hearts Limit Ventricular Dilation when Administered Late after Infarction

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