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Backmapping triangulated surfaces to coarse-grained membrane models

Nature communications, 2020-05, Vol.11 (1), p.2296-2296, Article 2296

2020

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Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models

Journal of chemical theory and computation, 2014-02, Vol.10 (2), p.676-690

2014

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Improved Parameters for the Martini Coarse-Grained Protein Force Field

Journal of chemical theory and computation, 2013-01, Vol.9 (1), p.687-697

2013

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Dynamic Cholesterol-Conditioned Dimerization of the G Protein Coupled Chemokine Receptor Type 4

PLoS computational biology, 2016-11, Vol.12 (11), p.e1005169-e1005169

2016

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LION/web: a web-based ontology enrichment tool for lipidomic data analysis

Gigascience, 2019-06, Vol.8 (6)

2019

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Martini 3: a general purpose force field for coarse-grained molecular dynamics

Nature methods, 2021-04, Vol.18 (4), p.382-388

2021

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Relationship Between CYP2A6 and CHRNA5-CHRNA3-CHRNB4 Variation and Smoking Behaviors and Lung Cancer Risk

JNCI : Journal of the National Cancer Institute, 2011-09, Vol.103 (17), p.1342-1346

2011

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Lipid–Protein Interactions Are Unique Fingerprints for Membrane Proteins

ACS central science, 2018-06, Vol.4 (6), p.709-717

2018

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Dopamine transporter oligomerization involves the scaffold domain, but spares the bundle domain

PLoS computational biology, 2018-06, Vol.14 (6), p.e1006229-e1006229

2018

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Activation of the bacterial thermosensor DesK involves a serine zipper dimerization motif that is modulated by bilayer thickness

Proceedings of the National Academy of Sciences - PNAS, 2015-05, Vol.112 (20), p.6353-6358

2015

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Multinational development and validation of an early prediction model for delirium in ICU patients

Intensive care medicine, 2015-06, Vol.41 (6), p.1048-1056

2015

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Synaptobrevin Transmembrane Domain Dimerization Studied by Multiscale Molecular Dynamics Simulations

Biophysical journal, 2015-08, Vol.109 (4), p.760-771

2015

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CYP2A6 reduced activity gene variants confer reduction in lung cancer risk in African American smokers--findings from two independent populations

Carcinogenesis (New York), 2015-01, Vol.36 (1), p.99-103

2015

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Structural Aspects of the ROS1 Kinase Domain and Oncogenic Mutations

Crystals (Basel), 2024-01, Vol.14 (2), p.106

2024

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Standard Lymph Node Dissection for Bladder Cancer: Significant Variability in the Number of Reported Lymph Nodes

The Journal of urology, 2012-02, Vol.187 (2), p.446-450

2012

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Thermodynamic and kinetic characterization of transmembrane helix association

Physical chemistry chemical physics : PCCP, 2015-01, Vol.17 (2), p.1390-1398

2015

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Competing Roles of Ca2+ and Nonmuscle Myosin IIA on the Dynamics of the Metastasis-Associated Protein S100A4

The journal of physical chemistry. B, 2021-09, Vol.125 (36), p.10059-10071

2021

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Constraint-Induced Movement Therapy Results in Increased Motor Map Area in Subjects 3 to 9 Months After Stroke

Neurorehabilitation and neural repair, 2008-09, Vol.22 (5), p.505-513

2008

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Competing Roles of Ca 2+ and Nonmuscle Myosin IIA on the Dynamics of the Metastasis-Associated Protein S100A4

The journal of physical chemistry. B, 2021-09, Vol.125 (36), p.10059-10071

2021

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Lipid Organization of the Plasma Membrane

Journal of the American Chemical Society, 2014-10, Vol.136 (41), p.14554-14559

2014

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Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations

Journal of chemical theory and computation, 2015-05, Vol.11 (5), p.2144-2155

2015

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Tracking animal migration with stable isotopes

1, 2008

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Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling

Structure (London), 2023-04, Vol.31 (4), p.492-503.e7

2023

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Unbreaking Assemblies in Molecular Simulations with Periodic Boundaries

Journal of chemical information and modeling, 2023-06, Vol.63 (11), p.3448-3452

2023

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Nucleobase-functionalized graphene nanoribbons for accurate high-speed DNA sequencing

Nanoscale, 2016-01, Vol.8 (4), p.1861-1867

2016

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Backmapping triangulated surfaces to coarse-grained membrane models

Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models

Improved Parameters for the Martini Coarse-Grained Protein Force Field

Dynamic Cholesterol-Conditioned Dimerization of the G Protein Coupled Chemokine Receptor Type 4

LION/web: a web-based ontology enrichment tool for lipidomic data analysis

Martini 3: a general purpose force field for coarse-grained molecular dynamics

Relationship Between CYP2A6 and CHRNA5-CHRNA3-CHRNB4 Variation and Smoking Behaviors and Lung Cancer Risk

Lipid–Protein Interactions Are Unique Fingerprints for Membrane Proteins

Dopamine transporter oligomerization involves the scaffold domain, but spares the bundle domain

Activation of the bacterial thermosensor DesK involves a serine zipper dimerization motif that is modulated by bilayer thickness

Multinational development and validation of an early prediction model for delirium in ICU patients

Synaptobrevin Transmembrane Domain Dimerization Studied by Multiscale Molecular Dynamics Simulations

CYP2A6 reduced activity gene variants confer reduction in lung cancer risk in African American smokers--findings from two independent populations

Structural Aspects of the ROS1 Kinase Domain and Oncogenic Mutations

Standard Lymph Node Dissection for Bladder Cancer: Significant Variability in the Number of Reported Lymph Nodes

Thermodynamic and kinetic characterization of transmembrane helix association

Competing Roles of Ca2+ and Nonmuscle Myosin IIA on the Dynamics of the Metastasis-Associated Protein S100A4

Constraint-Induced Movement Therapy Results in Increased Motor Map Area in Subjects 3 to 9 Months After Stroke

Competing Roles of Ca 2+ and Nonmuscle Myosin IIA on the Dynamics of the Metastasis-Associated Protein S100A4

Lipid Organization of the Plasma Membrane

Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations

Tracking animal migration with stable isotopes

Molecular architecture and dynamics of SARS-CoV-2 envelope by integrative modeling

Unbreaking Assemblies in Molecular Simulations with Periodic Boundaries

Nucleobase-functionalized graphene nanoribbons for accurate high-speed DNA sequencing

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