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Oncometabolite D-2-Hydroxyglutarate Inhibits ALKBH DNA Repair Enzymes and Sensitizes IDH Mutant Cells to Alkylating Agents

Cell reports (Cambridge), 2015-12, Vol.13 (11), p.2353-2361

2015

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Activation of the PD-1 pathway contributes to immune escape in EGFR-driven lung tumors

Cancer discovery, 2013-12, Vol.3 (12), p.1355-1363

2013

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Differential pathogenesis of lung adenocarcinoma subtypes involving sequence mutations, copy number, chromosomal instability, and methylation

PloS one, 2012-05, Vol.7 (5), p.e36530-e36530

2012

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ABRA: improved coding indel detection via assembly-based realignment

Bioinformatics (Oxford, England), 2014-10, Vol.30 (19), p.2813-2815

2014

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BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization

Cancer research (Chicago, Ill.), 2014-11, Vol.74 (22), p.6486-6498

2014

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Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

Cancer research (Chicago, Ill.), 2013-08, Vol.73 (16), p.5195-5205

2013

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Integrative and Comparative Genomic Analysis of Lung Squamous Cell Carcinomas in East Asian Patients

Journal of clinical oncology, 2014-01, Vol.32 (2), p.121-128

2014

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Factor XIIIA-expressing inflammatory monocytes promote lung squamous cancer through fibrin cross-linking

Nature communications, 2018-05, Vol.9 (1), p.1988-19, Article 1988

2018

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MutEnricher: a flexible toolset for somatic mutation enrichment analysis of tumor whole genomes

BMC bioinformatics, 2020-07, Vol.21 (1), p.1-338, Article 338

2020

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Lung Squamous Cell Carcinoma mRNA Expression Subtypes Are Reproducible, Clinically Important, and Correspond to Normal Cell Types

Clinical cancer research, 2010-10, Vol.16 (19), p.4864-4875

2010

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Integrated RNA and DNA sequencing improves mutation detection in low purity tumors

Nucleic acids research, 2014-07, Vol.42 (13), p.e107-e107

2014

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Identification of germline population variants misclassified as cancer-associated somatic variants

Frontiers in medicine, 2024-03, Vol.11, p.1361317-1361317

2024

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Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes

Nature communications, 2022-03, Vol.13 (1), p.1361-1361, Article 1361

2022

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ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

Bioinformatics, 2010-06, Vol.26 (12), p.1572-1573

2010

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The influence of microbial colonization on inflammatory versus pro-healing trajectories in combat extremity wounds

Scientific reports, 2024-03, Vol.14 (1), p.5006-5006, Article 5006

2024

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Transcriptomic Analysis of Mouse Brain After Traumatic Brain Injury Reveals That the Angiotensin Receptor Blocker Candesartan Acts Through Novel Pathways

Frontiers in neuroscience, 2021-03, Vol.15, p.636259-636259

2021

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Immune response profiles from humans experimentally exposed to Phlebotomus duboscqi bites

Frontiers in immunology, 2024-04, Vol.15, p.1335307-1335307

2024

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Neuroinflammatory astrocytes generated from cord blood-derived human induced pluripotent stem cells

Journal of neuroinflammation, 2019-08, Vol.16 (1), p.164-12, Article 164

2019

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NSC243928 Treatment Induces Anti-Tumor Immune Response in Mouse Mammary Tumor Models

Cancers, 2023-02, Vol.15 (5), p.1468

2023

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Genome-Wide Analysis of Exertional Rhabdomyolysis in Sickle Cell Trait Positive African Americans

Genes, 2024-04, Vol.15 (4), p.408

2024

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Hemophilia A Inhibitor Subjects Show Unique PBMC Gene Expression Profiles That Include Up-Regulated Innate Immune Modulators

Frontiers in immunology, 2020-06, Vol.11, p.1219-1219

2020

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Chromaffin cell biology: inferences from The Cancer Genome Atlas

Cell and tissue research, 2018-05, Vol.372 (2), p.339-346

2018

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Oncometabolite D-2-Hydroxyglutarate Inhibits ALKBH DNA Repair Enzymes and Sensitizes IDH Mutant Cells to Alkylating Agents

Activation of the PD-1 pathway contributes to immune escape in EGFR-driven lung tumors

Differential pathogenesis of lung adenocarcinoma subtypes involving sequence mutations, copy number, chromosomal instability, and methylation

Integrated Genomic Analysis Identifies Clinically Relevant Subtypes of Glioblastoma Characterized by Abnormalities in PDGFRA, IDH1, EGFR, and NF1

ABRA: improved coding indel detection via assembly-based realignment

BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization

Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

Integrative and Comparative Genomic Analysis of Lung Squamous Cell Carcinomas in East Asian Patients

Molecular subtypes in head and neck cancer exhibit distinct patterns of chromosomal gain and loss of canonical cancer genes

Factor XIIIA-expressing inflammatory monocytes promote lung squamous cancer through fibrin cross-linking

MutEnricher: a flexible toolset for somatic mutation enrichment analysis of tumor whole genomes

Lung Squamous Cell Carcinoma mRNA Expression Subtypes Are Reproducible, Clinically Important, and Correspond to Normal Cell Types

Integrated RNA and DNA sequencing improves mutation detection in low purity tumors

Identification of germline population variants misclassified as cancer-associated somatic variants

Germline mutation landscape of DNA damage repair genes in African Americans with prostate cancer highlights potentially targetable RAD genes

ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

The influence of microbial colonization on inflammatory versus pro-healing trajectories in combat extremity wounds

Transcriptomic Analysis of Mouse Brain After Traumatic Brain Injury Reveals That the Angiotensin Receptor Blocker Candesartan Acts Through Novel Pathways

Immune response profiles from humans experimentally exposed to Phlebotomus duboscqi bites

Neuroinflammatory astrocytes generated from cord blood-derived human induced pluripotent stem cells

NSC243928 Treatment Induces Anti-Tumor Immune Response in Mouse Mammary Tumor Models

Genome-Wide Analysis of Exertional Rhabdomyolysis in Sickle Cell Trait Positive African Americans

Hemophilia A Inhibitor Subjects Show Unique PBMC Gene Expression Profiles That Include Up-Regulated Innate Immune Modulators

Combined Targeted DNA Sequencing in Non-Small Cell Lung Cancer (NSCLC) Using UNCseq and NGScopy, and RNA Sequencing Using UNCqeR for the Detection of Genetic Aberrations in NSCLC

Chromaffin cell biology: inferences from The Cancer Genome Atlas

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