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Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing

The ISME Journal, 2014-11, Vol.8 (11), p.2243-2255

2014

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How low can you go?

eLife, 2018-01, Vol.7

Wiley, H Steven

2018

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Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models

Bioinformatics, 2008-12, Vol.24 (24), p.2894-2900

2008

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Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling

Bioinformatics, 2011-07, Vol.27 (13), p.i383-i391

2011

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Surfactant-assisted one-pot sample preparation for label-free single-cell proteomics

Communications biology, 2021-03, Vol.4 (1), p.265-12, Article 265

2021

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Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor

Molecular systems biology, 2009, Vol.5 (1), p.332-n/a

2009

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Targeted Quantification of Protein Phosphorylation and Its Contributions towards Mathematical Modeling of Signaling Pathways

Molecules (Basel, Switzerland), 2023-01, Vol.28 (3), p.1143

2023

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Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics

PloS one, 2013-06, Vol.8 (6), p.e66104-e66104

2013

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Flow-cytometric isolation of human antibodies from a nonimmune Saccharomyces cerevisiae surface display library

Nature biotechnology, 2003-02, Vol.21 (2), p.163-170

2003

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Targeting TLRs expands the antibody repertoire in response to a malaria vaccine

Science translational medicine, 2011-07, Vol.3 (93), p.93ra69

2011

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Computational modeling of the EGF-receptor system: a paradigm for systems biology

Trends in cell biology, 2003, Vol.13 (1), p.43-50

2003

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Cholesterol Dictates the Freedom of EGF Receptors and HER2 in the Plane of the Membrane

Biophysical journal, 2005-08, Vol.89 (2), p.1362-1373

2005

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TWEAK, a member of the TNF superfamily, is a multifunctional cytokine that binds the TweakR/Fn14 receptor

Cytokine & growth factor reviews, 2003-06, Vol.14 (3), p.241-249

2003

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Network analysis of epidermal growth factor signaling using integrated genomic, proteomic and phosphorylation data

PloS one, 2012-03, Vol.7 (3), p.e34515-e34515

2012

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Molecular Methods and Bioinformatic Tools for Adjuvant Characterization by High-Throughput Sequencing

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1494, p.353

2017

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An Integrated Model of Epidermal Growth Factor Receptor Trafficking and Signal Transduction

Biophysical journal, 2003-08, Vol.85 (2), p.730-743

2003

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Dynamics and Sensitivity of Signaling Pathways

Current pathobiology reports, 2022-06, Vol.10 (2), p.11-22

2022

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Blazing Signature Filter: a library for fast pairwise similarity comparisons

BMC bioinformatics, 2018-06, Vol.19 (1), p.221-221, Article 221

2018

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Cell surface receptors for signal transduction and ligand transport: a design principles study

PLoS computational biology, 2007-06, Vol.3 (6), p.e101-e101

2007

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A Novel TNF Receptor Family Member Binds TWEAK and Is Implicated in Angiogenesis

Immunity (Cambridge, Mass.), 2001-11, Vol.15 (5), p.837-846

2001

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Transcriptomic and proteomic signatures of stemness and differentiation in the colon crypt

Communications biology, 2020-08, Vol.3 (1), p.453, Article 453

2020

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Modeling the Effects of HER/ErbB1-3 Coexpression on Receptor Dimerization and Biological Response

Biophysical journal, 2006-06, Vol.90 (11), p.3993-4009

2006

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Identification of Proteins in Human Cytomegalovirus (HCMV) Particles: the HCMV Proteome

Journal of Virology, 2004-10, Vol.78 (20), p.10960-10966

2004

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Design patterns of biological cells

BioEssays, 2024-03, Vol.46 (3), p.e2300188-n/a

2024

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Generating synthetic signaling networks for in silico modeling studies

Journal of theoretical biology, 2024-10, Vol.593, p.111901, Article 111901

2024

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Inference of interactions in cyanobacterial-heterotrophic co-cultures via transcriptome sequencing

How low can you go?

Investigating the correspondence between transcriptomic and proteomic expression profiles using coupled cluster models

Characterization and improvement of RNA-Seq precision in quantitative transcript expression profiling

Surfactant-assisted one-pot sample preparation for label-free single-cell proteomics

Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor

Targeted Quantification of Protein Phosphorylation and Its Contributions towards Mathematical Modeling of Signaling Pathways

Coregulation of Terpenoid Pathway Genes and Prediction of Isoprene Production in Bacillus subtilis Using Transcriptomics

Flow-cytometric isolation of human antibodies from a nonimmune Saccharomyces cerevisiae surface display library

Targeting TLRs expands the antibody repertoire in response to a malaria vaccine

Computational modeling of the EGF-receptor system: a paradigm for systems biology

Cholesterol Dictates the Freedom of EGF Receptors and HER2 in the Plane of the Membrane

TWEAK, a member of the TNF superfamily, is a multifunctional cytokine that binds the TweakR/Fn14 receptor

Network analysis of epidermal growth factor signaling using integrated genomic, proteomic and phosphorylation data

Molecular Methods and Bioinformatic Tools for Adjuvant Characterization by High-Throughput Sequencing

An Integrated Model of Epidermal Growth Factor Receptor Trafficking and Signal Transduction

Dynamics and Sensitivity of Signaling Pathways

Blazing Signature Filter: a library for fast pairwise similarity comparisons

Cell surface receptors for signal transduction and ligand transport: a design principles study

A Novel TNF Receptor Family Member Binds TWEAK and Is Implicated in Angiogenesis

Transcriptomic and proteomic signatures of stemness and differentiation in the colon crypt

Modeling the Effects of HER/ErbB1-3 Coexpression on Receptor Dimerization and Biological Response

Identification of Proteins in Human Cytomegalovirus (HCMV) Particles: the HCMV Proteome

Design patterns of biological cells

Generating synthetic signaling networks for in silico modeling studies

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