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Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

Nature communications, 2020-03, Vol.11 (1), p.1157-1157, Article 1157

2020

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Evolutionarily informed machine learning enhances the power of predictive gene-to-phenotype relationships

Nature communications, 2021-09, Vol.12 (1), p.5627-5627, Article 5627

2021

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Repeat associated small RNAs vary among parents and following hybridization in maize

Proceedings of the National Academy of Sciences - PNAS, 2012-06, Vol.109 (26), p.10444-10449

2012

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Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants

Proceedings of the National Academy of Sciences - PNAS, 2018-06, Vol.115 (25), p.6494-6499

2018

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A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants

Trends in plant science, 2014-01, Vol.19 (1), p.5-9

2014

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Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution

PLoS genetics, 2014-07, Vol.10 (7), p.e1004487-e1004487

2014

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A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy

BMC genomics, 2012-04, Vol.13 (1), p.142-142, Article 142

2012

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Plant ecological genomics at the limits of life in the Atacama Desert

Proceedings of the National Academy of Sciences - PNAS, 2021-11, Vol.118 (46), p.1

2021

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Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis

Proceedings of the National Academy of Sciences - PNAS, 2014-07, Vol.111 (28), p.10371-10376

2014

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Genes involved in convergent evolution of eusociality in bees

Proceedings of the National Academy of Sciences - PNAS, 2011-05, Vol.108 (18), p.7472-7477

2011

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From milliseconds to lifetimes: tracking the dynamic behavior of transcription factors in gene networks

Trends in genetics, 2015-09, Vol.31 (9), p.509-515

2015

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Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey

BMC genomics, 2007-05, Vol.8 (1), p.132-132, Article 132

2007

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CAND1 is required for pollen viability in Arabidopsis thaliana -a test of the adaptive exchange hypothesis

Frontiers in plant science, 2022-07, Vol.13, p.866086-866086

2022

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Wasp Gene Expression Supports an Evolutionary Link Between Maternal Behavior and Eusociality

Science (American Association for the Advancement of Science), 2007-10, Vol.318 (5849), p.441-444

2007

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The inheritance pattern of 24 nt siRNA clusters in arabidopsis hybrids is influenced by proximity to transposable elements

PloS one, 2012-10, Vol.7 (10), p.e47043-e47043

2012

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A fluorescence in situ hybridization system for karyotyping soybean

Genetics (Austin), 2010-07, Vol.185 (3), p.727-744

2010

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Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max

BMC plant biology, 2012-10, Vol.12 (1), p.177-177, Article 177

2012

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Rapid genotyping of soybean cultivars using high throughput sequencing

PloS one, 2011-09, Vol.6 (9), p.e24811-e24811

2011

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Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella

BMC genomics, 2009-12, Vol.10 (1), p.633-633

2009

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Genomic and small RNA sequencing of Miscanthus × giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses

GenomeBiology.com, 2010-01, Vol.11 (2), p.R12-R12

2010

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A Systems Biology Approach to Identify Essential Epigenetic Regulators for Specific Biological Processes in Plants

Plants (Basel), 2021-02, Vol.10 (2), p.364

2021

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Brain transcriptomic analysis in paper wasps identifies genes associated with behaviour across social insect lineages

Proceedings of the Royal Society. B, Biological sciences, 2010-07, Vol.277 (1691), p.2139-2148

2010

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Organ-delimited gene regulatory networks provide high accuracy in candidate transcription factor selection across diverse processes

Proceedings of the National Academy of Sciences - PNAS, 2024-04, Vol.121 (18), p.e2322751121

2024

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Endogenous, Tissue-Specific Short Interfering RNAs Silence the Chalcone Synthase Gene Family in Glycine max Seed Coats

The Plant cell, 2009-10, Vol.21 (10), p.3063-3077

2009

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Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

The New phytologist, 2022-06, Vol.234 (5), p.1614-1628

2022

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Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

Evolutionarily informed machine learning enhances the power of predictive gene-to-phenotype relationships

Repeat associated small RNAs vary among parents and following hybridization in maize

Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants

A unified nomenclature of NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family members in plants

Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution

A framework genetic map for Miscanthus sinensis from RNAseq-based markers shows recent tetraploidy

Plant ecological genomics at the limits of life in the Atacama Desert

Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis

Genes involved in convergent evolution of eusociality in bees

From milliseconds to lifetimes: tracking the dynamic behavior of transcription factors in gene networks

Global repeat discovery and estimation of genomic copy number in a large, complex genome using a high-throughput 454 sequence survey

CAND1 is required for pollen viability in Arabidopsis thaliana -a test of the adaptive exchange hypothesis

Wasp Gene Expression Supports an Evolutionary Link Between Maternal Behavior and Eusociality

The inheritance pattern of 24 nt siRNA clusters in arabidopsis hybrids is influenced by proximity to transposable elements

A fluorescence in situ hybridization system for karyotyping soybean

Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max

Rapid genotyping of soybean cultivars using high throughput sequencing

Sympatric ecological speciation meets pyrosequencing: sampling the transcriptome of the apple maggot Rhagoletis pomonella

Genomic and small RNA sequencing of Miscanthus × giganteus shows the utility of sorghum as a reference genome sequence for Andropogoneae grasses

A Systems Biology Approach to Identify Essential Epigenetic Regulators for Specific Biological Processes in Plants

Brain transcriptomic analysis in paper wasps identifies genes associated with behaviour across social insect lineages

Organ-delimited gene regulatory networks provide high accuracy in candidate transcription factor selection across diverse processes

Endogenous, Tissue-Specific Short Interfering RNAs Silence the Chalcone Synthase Gene Family in Glycine max Seed Coats

Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

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