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Dimer formation enhances structural differences between amyloid β-protein (1-40) and (1-42): an explicit-solvent molecular dynamics study

PloS one, 2012, Vol.7 (4), p.e34345-e34345

2012

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Oligomer Formation by Physiologically Relevant C-Terminal Isoforms of Amyloid β-Protein

Biomolecules (Basel, Switzerland), 2024-06, Vol.14 (7), p.774

2024

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Fully Atomistic Aβ40 and Aβ42 Oligomers in Water: Observation of Porelike Conformations

Journal of chemical theory and computation, 2017-09, Vol.13 (9), p.4567-4583

2017

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Cross-Linked Amyloid β‑Protein Oligomers: A Missing Link in Alzheimer’s Disease Pathology?

The journal of physical chemistry. B, 2021-02, Vol.125 (5), p.1307-1316

Urbanc, Brigita

2021

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pH-Independence of Trialanine and the Effects of Termini Blocking in Short Peptides: A Combined Vibrational, NMR, UVCD, and Molecular Dynamics Study

The journal of physical chemistry. B, 2013-04, Vol.117 (14), p.3689-3706

2013

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Insights into Aβ aggregation: a molecular dynamics perspective

Current topics in medicinal chemistry, 2012-11, Vol.12 (22), p.2596-2610

2012

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Glycine in Water Favors the Polyproline II State

Biomolecules (Basel, Switzerland), 2020-07, Vol.10 (8), p.1121

2020

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Oligomer formation by naturally occurring C-terminal isoforms of amyloid β-protein

Biophysical journal, 2024-02, Vol.123 (3), p.73a-73a

2024

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C-terminal peptides coassemble into Aβ42 oligomers and protect neurons against Aβ42-induced neurotoxicity

Proceedings of the National Academy of Sciences - PNAS, 2008-09, Vol.105 (37), p.14175-14180

2008

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Biophysical Characterization of Aβ42 C-Terminal Fragments: Inhibitors of Aβ42 Neurotoxicity

Biochemistry (Easton), 2010-02, Vol.49 (6), p.1259-1267

2010

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Discrete Molecular Dynamics Study of Oligomer Formation by N-Terminally Truncated Amyloid β-Protein

Journal of molecular biology, 2013-06, Vol.425 (12), p.2260-2275

2013

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Solvent and Mutation Effects on the Nucleation of Amyloid β-Protein Folding

Proceedings of the National Academy of Sciences - PNAS, 2005-12, Vol.102 (51), p.18258-18263

2005

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Intrinsic Conformational Dynamics of Glycine and Alanine in Polarizable Molecular Dynamics Force Fields: Comparison to Spectroscopic Data

The journal of physical chemistry. B, 2024-06, Vol.128 (25), p.6217-6231

2024

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Flexible N‐Termini of Amyloid β‐Protein Oligomers: A Link between Structure and Activity?

Israel journal of chemistry, 2017-07, Vol.57 (7-8), p.651-664

Urbanc, Brigita

2017

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Towards experimentally parametrized molecular dynamics force field for intrinsically disordered proteins

Biophysical journal, 2024-02, Vol.123 (3), p.72a-72a

2024

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Minimal Model of Self-Assembly: Emergence of Diversity and Complexity

The journal of physical chemistry. B, 2014-04, Vol.118 (14), p.3761-3770

2014

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Mechanistic Investigation of the Inhibition of Aβ42 Assembly and Neurotoxicity by Aβ42 C-Terminal Fragments

Biochemistry (Easton), 2010-08, Vol.49 (30), p.6358-6364

2010

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Folding Events in the 21-30 Region of Amyloid β-Protein (Aβ) Studied in silico

Proceedings of the National Academy of Sciences - PNAS, 2005-04, Vol.102 (17), p.6015-6020

2005

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Do Molecular Dynamics Force Fields Capture Conformational Dynamics of Alanine in Water?

Journal of chemical theory and computation, 2020-01, Vol.16 (1), p.510-527

2020

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Ab initio Discrete Molecular Dynamics Approach to Protein Folding and Aggregation

Methods in Enzymology, 2006, Vol.412, p.314-338

2006

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How do salt and lipids affect conformational dynamics of Aβ42 monomers in water?

Physical chemistry chemical physics : PCCP, 2023-01, Vol.25 (3), p.2566-2583

2023

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Soluble State of Villin Headpiece Protein as a Tool in the Assessment of MD Force Fields

The journal of physical chemistry. B, 2021-07, Vol.125 (25), p.6897-6911

2021

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Flexible N-Termini of Amyloid [beta]-Protein Oligomers: A Link between Structure and Activity?

Israel journal of chemistry, 2017-07, Vol.57 (7-8), p.651

Urbanc, Brigita

2017

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Do molecular dynamics force fields accurately model Ramachandran distributions of amino acid residues in water?

Physical chemistry chemical physics : PCCP, 2022-02, Vol.24 (5), p.3259-3279

2022

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Conformational Dynamics of Alanine in Water and Water/Ethanol Mixtures: Experimentally Driven Evaluation of Molecular Dynamics Force Fields

Biophysical journal, 2020-02, Vol.118 (3), p.502a-502a

2020

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Dimer formation enhances structural differences between amyloid β-protein (1-40) and (1-42): an explicit-solvent molecular dynamics study

Oligomer Formation by Physiologically Relevant C-Terminal Isoforms of Amyloid β-Protein

Fully Atomistic Aβ40 and Aβ42 Oligomers in Water: Observation of Porelike Conformations

Cross-Linked Amyloid β‑Protein Oligomers: A Missing Link in Alzheimer’s Disease Pathology?

pH-Independence of Trialanine and the Effects of Termini Blocking in Short Peptides: A Combined Vibrational, NMR, UVCD, and Molecular Dynamics Study

Insights into Aβ aggregation: a molecular dynamics perspective

Glycine in Water Favors the Polyproline II State

Oligomer formation by naturally occurring C-terminal isoforms of amyloid β-protein

C-terminal peptides coassemble into Aβ42 oligomers and protect neurons against Aβ42-induced neurotoxicity

Biophysical Characterization of Aβ42 C-Terminal Fragments: Inhibitors of Aβ42 Neurotoxicity

Discrete Molecular Dynamics Study of Oligomer Formation by N-Terminally Truncated Amyloid β-Protein

Solvent and Mutation Effects on the Nucleation of Amyloid β-Protein Folding

Intrinsic Conformational Dynamics of Glycine and Alanine in Polarizable Molecular Dynamics Force Fields: Comparison to Spectroscopic Data

Flexible N‐Termini of Amyloid β‐Protein Oligomers: A Link between Structure and Activity?

Towards experimentally parametrized molecular dynamics force field for intrinsically disordered proteins

Minimal Model of Self-Assembly: Emergence of Diversity and Complexity

Mechanistic Investigation of the Inhibition of Aβ42 Assembly and Neurotoxicity by Aβ42 C-Terminal Fragments

Folding Events in the 21-30 Region of Amyloid β-Protein (Aβ) Studied in silico

Do Molecular Dynamics Force Fields Capture Conformational Dynamics of Alanine in Water?

Ab initio Discrete Molecular Dynamics Approach to Protein Folding and Aggregation

How do salt and lipids affect conformational dynamics of Aβ42 monomers in water?

Soluble State of Villin Headpiece Protein as a Tool in the Assessment of MD Force Fields

Flexible N-Termini of Amyloid [beta]-Protein Oligomers: A Link between Structure and Activity?

Do molecular dynamics force fields accurately model Ramachandran distributions of amino acid residues in water?

Conformational Dynamics of Alanine in Water and Water/Ethanol Mixtures: Experimentally Driven Evaluation of Molecular Dynamics Force Fields

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