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Whole-body and Whole-Organ Clearing and Imaging Techniques with Single-Cell Resolution: Toward Organism-Level Systems Biology in Mammals

Cell chemical biology, 2016-01, Vol.23 (1), p.137-157

2016

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Tissue clearing and its applications in neuroscience

Nature reviews. Neuroscience, 2020-02, Vol.21 (2), p.61-79

2020

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Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

Cell, 2014-04, Vol.157 (3), p.726-739

2014

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Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging

Nature protocols, 2015-11, Vol.10 (11), p.1709-1727

2015

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Chemical Principles in Tissue Clearing and Staining Protocols for Whole-Body Cell Profiling

Annual review of cell and developmental biology, 2016-10, Vol.32 (1), p.713-741

2016

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Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy

Neuron (Cambridge, Mass.), 2020-05, Vol.106 (3), p.369-387

2020

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Whole-body imaging with single-cell resolution by tissue decolorization

Cell, 2014-11, Vol.159 (4), p.911-924

2014

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Context-dependent wiring of Sox2 regulatory networks for self-renewal of embryonic and trophoblast stem cells

Molecular cell, 2013-11, Vol.52 (3), p.380-392

2013

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Synthesis of 4′-C-(aminoethyl)thymidine and 4′-C-[(N-methyl)aminoethyl]thymidine by a new synthetic route and evaluation of the properties of the DNAs containing the nucleoside analogs

Bioorganic & medicinal chemistry, 2022-04, Vol.60, p.116690-116690, Article 116690

2022

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A three-dimensional single-cell-resolution whole-brain atlas using CUBIC-X expansion microscopy and tissue clearing

Nature neuroscience, 2018-04, Vol.21 (4), p.625-637

2018

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Systems biology of mammalian circadian clocks

Annual review of physiology, 2010-01, Vol.72 (1), p.579-603

2010

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The oral hypoxia-inducible factor prolyl hydroxylase inhibitor enarodustat counteracts alterations in renal energy metabolism in the early stages of diabetic kidney disease

Kidney international, 2020-05, Vol.97 (5), p.934-950

2020

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Whole-Body Profiling of Cancer Metastasis with Single-Cell Resolution

Cell reports (Cambridge), 2017-07, Vol.20 (1), p.236-250

2017

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Involvement of Ca2+-Dependent Hyperpolarization in Sleep Duration in Mammals

Neuron (Cambridge, Mass.), 2016-04, Vol.90 (1), p.70-85

2016

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Easy and efficient production of completely embryonic-stem-cell-derived mice using a micro-aggregation device

PloS one, 2018-09, Vol.13 (9), p.e0203056-e0203056

2018

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Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity

Genome biology, 2013-04, Vol.14 (4), p.R31-R31, Article 3097

2013

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Ca2+‐Dependent Hyperpolarization Pathways in Sleep Homeostasis and Mental Disorders

BioEssays, 2018-01, Vol.40 (1), p.n/a

2018

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Versatile whole-organ/body staining and imaging based on electrolyte-gel properties of biological tissues

Nature communications, 2020-04, Vol.11 (1), p.1982-22, Article 1982

2020

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Mass spectrometry-based absolute quantification of amyloid proteins in pathology tissue specimens: Merits and limitations

PloS one, 2020-07, Vol.15 (7), p.e0235143-e0235143

2020

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The 103,200-arm acceleration dataset in the UK Biobank revealed a landscape of human sleep phenotypes

Proceedings of the National Academy of Sciences - PNAS, 2022-03, Vol.119 (12), p.e2116729119

2022

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Genetic and epigenetic basis of hepatoblastoma diversity

Nature communications, 2021-09, Vol.12 (1), p.5423-16, Article 5423

2021

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The circadian clock ticks in organoids

The EMBO journal, 2022-12, Vol.41 (2), p.e110157-n/a

2022

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Phosphorylation by casein kinase 2 enhances the interaction between ER‐phagy receptor TEX264 and ATG8 proteins

EMBO reports, 2022-06, Vol.23 (6), p.e54801-n/a

2022

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Elucidation of the mechanism of amyloid A and transthyretin formation using mass spectrometry-based absolute quantification

Virchows Archiv : an international journal of pathology, 2023-07

2023

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Bridge Deflection Measurement Using Digital Image Correlation with Camera Movement Correction

Materials transactions, 2012-02, Vol.53 (2), p.285-290

2012

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Whole-body and Whole-Organ Clearing and Imaging Techniques with Single-Cell Resolution: Toward Organism-Level Systems Biology in Mammals

Tissue clearing and its applications in neuroscience

Whole-Brain Imaging with Single-Cell Resolution Using Chemical Cocktails and Computational Analysis

Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging

Chemical Principles in Tissue Clearing and Staining Protocols for Whole-Body Cell Profiling

Whole-Brain Profiling of Cells and Circuits in Mammals by Tissue Clearing and Light-Sheet Microscopy

Whole-body imaging with single-cell resolution by tissue decolorization

Context-dependent wiring of Sox2 regulatory networks for self-renewal of embryonic and trophoblast stem cells

Synthesis of 4′-C-(aminoethyl)thymidine and 4′-C-[(N-methyl)aminoethyl]thymidine by a new synthetic route and evaluation of the properties of the DNAs containing the nucleoside analogs

A three-dimensional single-cell-resolution whole-brain atlas using CUBIC-X expansion microscopy and tissue clearing

Systems biology of mammalian circadian clocks

The oral hypoxia-inducible factor prolyl hydroxylase inhibitor enarodustat counteracts alterations in renal energy metabolism in the early stages of diabetic kidney disease

Whole-Body Profiling of Cancer Metastasis with Single-Cell Resolution

Involvement of Ca2+-Dependent Hyperpolarization in Sleep Duration in Mammals

Easy and efficient production of completely embryonic-stem-cell-derived mice using a micro-aggregation device

Quartz-Seq: a highly reproducible and sensitive single-cell RNA sequencing method, reveals non-genetic gene-expression heterogeneity

Ca2+‐Dependent Hyperpolarization Pathways in Sleep Homeostasis and Mental Disorders

Versatile whole-organ/body staining and imaging based on electrolyte-gel properties of biological tissues

Mass spectrometry-based absolute quantification of amyloid proteins in pathology tissue specimens: Merits and limitations

The 103,200-arm acceleration dataset in the UK Biobank revealed a landscape of human sleep phenotypes

Genetic and epigenetic basis of hepatoblastoma diversity

The circadian clock ticks in organoids

Phosphorylation by casein kinase 2 enhances the interaction between ER‐phagy receptor TEX264 and ATG8 proteins

Elucidation of the mechanism of amyloid A and transthyretin formation using mass spectrometry-based absolute quantification

Bridge Deflection Measurement Using Digital Image Correlation with Camera Movement Correction

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