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Oxidative Strand Scission of Nucleic Acids: Routes Initiated by Hydrogen Abstraction from the Sugar Moiety

Chemical reviews, 1998-05, Vol.98 (3), p.1089-1108

1998

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A Map of Minor Groove Shape and Electrostatic Potential from Hydroxyl Radical Cleavage Patterns of DNA

ACS chemical biology, 2011-12, Vol.6 (12), p.1314-1320

2011

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DNA Strand Breaking by the Hydroxyl Radical is Governed by the Accessible Surface Areas of the Hydrogen Atoms of the DNA Backbone

Proceedings of the National Academy of Sciences - PNAS, 1998-08, Vol.95 (17), p.9738-9743

1998

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GBshape: a genome browser database for DNA shape annotations

Nucleic acids research, 2015-01, Vol.43 (D1), p.D103-D109

2015

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Platinum Anticancer Drug Damage Enforces a Particular Rotational Setting of DNA in Nucleosomes

Proceedings of the National Academy of Sciences - PNAS, 2005-08, Vol.102 (35), p.12311-12316

2005

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Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome

Science (American Association for the Advancement of Science), 2009-04, Vol.324 (5925), p.389-392

2009

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Experimental maps of DNA structure at nucleotide resolution distinguish intrinsic from protein-induced DNA deformations

Nucleic acids research, 2018-03, Vol.46 (5), p.2636-2647

2018

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GBshape: a genome browser database for DNA shape annotations

Nucleic acids research, 2015-01, Vol.43 (Database issue), p.D103

2015

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Footprinting protein-DNA complexes using the hydroxyl radical

Nature protocols, 2008-06, Vol.3 (6), p.1092-1100

2008

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Mapping nucleic acid structure by hydroxyl radical cleavage

Current opinion in chemical biology, 2005-04, Vol.9 (2), p.127-134

2005

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Chemical probing of RNA with the hydroxyl radical at single-atom resolution

Nucleic acids research, 2014-11, Vol.42 (20), p.12758-12767

2014

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Gapped DNA Is Anisotropically Bent

Proceedings of the National Academy of Sciences - PNAS, 2003-04, Vol.100 (7), p.3743-3747

2003

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Construction of a genome-scale structural map at single-nucleotide resolution

Genome Research, 2007-06, Vol.17 (6), p.947-953

2007

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Effects of Discontinuities in the DNA Template on Abortive Initiation and Promoter Escape by Escherichia coli RNA Polymerase

The Journal of biological chemistry, 2007-09, Vol.282 (37), p.26917-26927

2007

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DNA shape, genetic codes, and evolution

Current opinion in structural biology, 2011-06, Vol.21 (3), p.342-347

2011

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A general synthesis of specifically deuterated nucleotides for studies of DNA and RNA

Bioorganic & medicinal chemistry letters, 2002-11, Vol.12 (21), p.3093-3096

2002

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28 GBshape: a genome browser database for DNA shape annotations

Journal of biomolecular structure & dynamics, 2015-05, Vol.33 (sup1), p.16-16

2015

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Detection of DNA structural motifs in functional genomic elements

Genome Research, 2007-06, Vol.17 (6), p.940-946

2007

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THE RELATIONSHIP BETWEEN FINE SCALE DNA STRUCTURE, GC CONTENT, AND FUNCTIONAL ELEMENTS IN 1% OF THE HUMAN GENOME

Genome Informatics, 2008, Vol.20, pp.199-211

2008

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Nucleosome Structural Features and Intrinsic Properties of the TATAAACGCC Repeat Sequence

The Journal of biological chemistry, 1999-11, Vol.274 (45), p.31847-31852

1999

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The solution structure of the amino-terminal HHCC domain of HIV-2 integrase: a three-helix bundle stabilized by zinc

Current biology, 1997-10, Vol.7 (10), p.739-746

1997

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High-Resolution in Vivo Footprinting of a Protein−DNA Complex Using γ-Radiation

Journal of the American Chemical Society, 2000-06, Vol.122 (24), p.5901-5902

2000

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Interchange of DNA-binding Modes in the Deformed and Ultrabithorax Homeodomains: A Structural Role for the N-terminal Arm

Journal of molecular biology, 2002-11, Vol.323 (4), p.665-683

2002

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The unusual conformation adopted by the adenine tracts in kinetoplast DNA

Cell, 1987-03, Vol.48 (6), p.935-943

1987

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The Yeast Transcription Factor Mac1 Binds to DNA in a Modular Fashion

The Journal of biological chemistry, 1999-09, Vol.274 (38), p.26962-26967

1999

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Oxidative Strand Scission of Nucleic Acids: Routes Initiated by Hydrogen Abstraction from the Sugar Moiety

A Map of Minor Groove Shape and Electrostatic Potential from Hydroxyl Radical Cleavage Patterns of DNA

DNA Strand Breaking by the Hydroxyl Radical is Governed by the Accessible Surface Areas of the Hydrogen Atoms of the DNA Backbone

GBshape: a genome browser database for DNA shape annotations

Platinum Anticancer Drug Damage Enforces a Particular Rotational Setting of DNA in Nucleosomes

Local DNA Topography Correlates with Functional Noncoding Regions of the Human Genome

Experimental maps of DNA structure at nucleotide resolution distinguish intrinsic from protein-induced DNA deformations

GBshape: a genome browser database for DNA shape annotations

Footprinting protein-DNA complexes using the hydroxyl radical

Mapping nucleic acid structure by hydroxyl radical cleavage

Chemical probing of RNA with the hydroxyl radical at single-atom resolution

Gapped DNA Is Anisotropically Bent

Construction of a genome-scale structural map at single-nucleotide resolution

Effects of Discontinuities in the DNA Template on Abortive Initiation and Promoter Escape by Escherichia coli RNA Polymerase

DNA shape, genetic codes, and evolution

A general synthesis of specifically deuterated nucleotides for studies of DNA and RNA

28 GBshape: a genome browser database for DNA shape annotations

Detection of DNA structural motifs in functional genomic elements

THE RELATIONSHIP BETWEEN FINE SCALE DNA STRUCTURE, GC CONTENT, AND FUNCTIONAL ELEMENTS IN 1% OF THE HUMAN GENOME

Nucleosome Structural Features and Intrinsic Properties of the TATAAACGCC Repeat Sequence

The solution structure of the amino-terminal HHCC domain of HIV-2 integrase: a three-helix bundle stabilized by zinc

High-Resolution in Vivo Footprinting of a Protein−DNA Complex Using γ-Radiation

Interchange of DNA-binding Modes in the Deformed and Ultrabithorax Homeodomains: A Structural Role for the N-terminal Arm

The unusual conformation adopted by the adenine tracts in kinetoplast DNA

The Yeast Transcription Factor Mac1 Binds to DNA in a Modular Fashion

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