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Exploiting dynamic enhancer landscapes to decode macrophage and microglia phenotypes in health and disease

Molecular cell, 2021-10, Vol.81 (19), p.3888-3903

2021

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Niche-Specific Reprogramming of Epigenetic Landscapes Drives Myeloid Cell Diversity in Nonalcoholic Steatohepatitis

Immunity (Cambridge, Mass.), 2020-06, Vol.52 (6), p.1057-1074.e7

2020

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Breaking down the complex pathophysiology of eosinophilic esophagitis

Annals of allergy, asthma, & immunology, 2023-01, Vol.130 (1), p.28-39

2023

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Heterogeneity of HSCs in a Mouse Model of NASH

Hepatology (Baltimore, Md.), 2021-08, Vol.74 (2), p.667-685

2021

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Neutralization of Oxidized Phospholipids Ameliorates Non-alcoholic Steatohepatitis

Cell metabolism, 2020-01, Vol.31 (1), p.189-206.e8

2020

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Epigenetic Regulation of Kupffer Cell Function in Health and Disease

Frontiers in immunology, 2021-01, Vol.11, p.609618-609618

2021

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Liver-Derived Signals Sequentially Reprogram Myeloid Enhancers to Initiate and Maintain Kupffer Cell Identity

Immunity (Cambridge, Mass.), 2019-10, Vol.51 (4), p.655-670.e8

2019

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Expansion of interferon inducible gene pool via USP18 inhibition promotes cancer cell pyroptosis

Nature communications, 2023-01, Vol.14 (1), p.251-251, Article 251

2023

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Cell-specific discrimination of desmosterol and desmosterol mimetics confers selective regulation of LXR and SREBP in macrophages

Proceedings of the National Academy of Sciences - PNAS, 2018-05, Vol.115 (20), p.E4680-E4689

2018

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Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function

Cell, 2018-06, Vol.173 (7), p.1796-1809.e17

2018

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Eosinophil Specialization Is Regulated by Exposure to the Esophageal Epithelial Microenvironment

Journal of leukocyte biology, 2024-11, Vol.116 (5), p.1007-1020

2024

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TLR signaling adapter BCAP regulates inflammatory to reparatory macrophage transition by promoting histone lactylation

Proceedings of the National Academy of Sciences - PNAS, 2020-12, Vol.117 (48), p.30628-30638

2020

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Priming Microenvironments Dictate Cytokine Requirements for T Helper 17 Cell Lineage Commitment

Immunity (Cambridge, Mass.), 2011-12, Vol.35 (6), p.1010-1022

2011

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Discrimination of cell-intrinsic and environment-dependent effects of natural genetic variation on Kupffer cell epigenomes and transcriptomes

Nature immunology, 2023-11, Vol.24 (11), p.1825-1838

2023

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Toll-like receptors, signaling adapters and regulation of the pro-inflammatory response by PI3K

Cell cycle (Georgetown, Tex.), 2012-10, Vol.11 (19), p.3559-3567

2012

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Kruppel-like factor 2+ CD4 T cells avert microbiota-induced intestinal inflammation

Cell reports (Cambridge), 2023-11, Vol.42 (11), p.113323-113323, Article 113323

2023

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A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation

Proceedings of the National Academy of Sciences - PNAS, 2024-01, Vol.121 (2), p.e2316104121-e2316104121

2024

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IRAK-1 bypasses priming and directly links TLRs to rapid NLRP3 inflammasome activation

Proceedings of the National Academy of Sciences - PNAS, 2014-01, Vol.111 (2), p.775-780

2014

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Setd5 haploinsufficiency alters neuronal network connectivity and leads to autistic-like behaviors in mice

Translational psychiatry, 2019-01, Vol.9 (1), p.24-24, Article 24

2019

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An upstream enhancer regulates Gpihbp1 expression in a tissue-specific manner[S]

Journal of lipid research, 2019-04, Vol.60 (4), p.869-879

2019

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Purification of mouse hepatic non-parenchymal cells or nuclei for use in ChIP-seq and other next-generation sequencing approaches

STAR protocols, 2021-03, Vol.2 (1), p.100363-100363, Article 100363

2021

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An optimized protocol for rapid, sensitive and robust on-bead ChIP-seq from primary cells

STAR protocols, 2021-03, Vol.2 (1), p.100358-100358, Article 100358

2021

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Role for B-cell adapter for PI3K (BCAP) as a signaling adapter linking Toll-like receptors (TLRs) to serine/threonine kinases PI3K/Akt

Proceedings of the National Academy of Sciences - PNAS, 2012-01, Vol.109 (1), p.273-278

2012

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BCAP links IL-1R to the PI3K-mTOR pathway and regulates pathogenic Th17 cell differentiation

The Journal of experimental medicine, 2018-09, Vol.215 (9), p.2413-2428

2018

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Aryl hydrocarbon receptor and IL-13 signaling crosstalk in human keratinocytes and atopic dermatitis

Frontiers in allergy, 2024, Vol.5, p.1323405-1323405

2024

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Exploiting dynamic enhancer landscapes to decode macrophage and microglia phenotypes in health and disease

Niche-Specific Reprogramming of Epigenetic Landscapes Drives Myeloid Cell Diversity in Nonalcoholic Steatohepatitis

Breaking down the complex pathophysiology of eosinophilic esophagitis

Heterogeneity of HSCs in a Mouse Model of NASH

Neutralization of Oxidized Phospholipids Ameliorates Non-alcoholic Steatohepatitis

Epigenetic Regulation of Kupffer Cell Function in Health and Disease

Liver-Derived Signals Sequentially Reprogram Myeloid Enhancers to Initiate and Maintain Kupffer Cell Identity

Expansion of interferon inducible gene pool via USP18 inhibition promotes cancer cell pyroptosis

Cell-specific discrimination of desmosterol and desmosterol mimetics confers selective regulation of LXR and SREBP in macrophages

Analysis of Genetically Diverse Macrophages Reveals Local and Domain-wide Mechanisms that Control Transcription Factor Binding and Function

Eosinophil Specialization Is Regulated by Exposure to the Esophageal Epithelial Microenvironment

TLR signaling adapter BCAP regulates inflammatory to reparatory macrophage transition by promoting histone lactylation

Priming Microenvironments Dictate Cytokine Requirements for T Helper 17 Cell Lineage Commitment

Discrimination of cell-intrinsic and environment-dependent effects of natural genetic variation on Kupffer cell epigenomes and transcriptomes

Toll-like receptors, signaling adapters and regulation of the pro-inflammatory response by PI3K

Kruppel-like factor 2+ CD4 T cells avert microbiota-induced intestinal inflammation

A TLR4/TRAF6-dependent signaling pathway mediates NCoR coactivator complex formation for inflammatory gene activation

IRAK-1 bypasses priming and directly links TLRs to rapid NLRP3 inflammasome activation

Setd5 haploinsufficiency alters neuronal network connectivity and leads to autistic-like behaviors in mice

An upstream enhancer regulates Gpihbp1 expression in a tissue-specific manner[S]

Purification of mouse hepatic non-parenchymal cells or nuclei for use in ChIP-seq and other next-generation sequencing approaches

An optimized protocol for rapid, sensitive and robust on-bead ChIP-seq from primary cells

Role for B-cell adapter for PI3K (BCAP) as a signaling adapter linking Toll-like receptors (TLRs) to serine/threonine kinases PI3K/Akt

BCAP links IL-1R to the PI3K-mTOR pathway and regulates pathogenic Th17 cell differentiation

Aryl hydrocarbon receptor and IL-13 signaling crosstalk in human keratinocytes and atopic dermatitis

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