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Network analysis and in silico prediction of protein–protein interactions with applications in drug discovery

Current opinion in structural biology, 2017-06, Vol.44, p.134-142

2017

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TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery

PloS one, 2011-03, Vol.6 (3), p.e17844

2011

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Bijoliya Vindhyan Supergroup Sandstone Region of Rajasthan, India: Conservation of Geoheritage and Geotourism

Geoheritage, 2024-03, Vol.16 (1), Article 15

2024

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Long Non-Coding RNAs, Nuclear Receptors and Their Cross-Talks in Cancer-Implications and Perspectives

Cancers, 2024-08, Vol.16 (16), p.2920

2024

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Cross genome comparisons of serine proteases in Arabidopsis and rice

BMC genomics, 2006-08, Vol.7 (1), p.200-200, Article 200

2006

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Network modeling and inference of peroxisome proliferator-activated receptor pathway in high fat diet-linked obesity

Journal of theoretical biology, 2021-06, Vol.519, p.110647-110647, Article 110647

2021

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Flavivirus recruits the valosin-containing protein–NPL4 complex to induce stress granule disassembly for efficient viral genome replication

The Journal of biological chemistry, 2022-03, Vol.298 (3), p.101597-101597, Article 101597

2022

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Genome-wide survey of prokaryotic serine proteases: analysis of distribution and domain architectures of five serine protease families in prokaryotes

BMC genomics, 2008-11, Vol.9 (1), p.549-549

2008

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Biology of Bone Morphogenetic Proteins in Skeleton Disease: Osteonecrosis in Sickle Cell Disease Patients

Current protein & peptide science, 2022-04, Vol.23 (4), p.264-270

2022

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Applications of lignin nanoparticles for cancer drug delivery: An update

Materials letters, 2022-03, Vol.311, p.131573, Article 131573

2022

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Host-pathogen protein-nucleic acid interactions: A comprehensive review

Computational and structural biotechnology journal, 2022-01, Vol.20, p.4415-4436

2022

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Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism

Nucleic acids research, 2018-01, Vol.46 (1), p.54-70

2018

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CLINE: a web-tool for the comparison of biological dendrogram structures

BMC bioinformatics, 2019-10, Vol.20 (1), p.528-528, Article 528

2019

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The TargetMine Data Warehouse: Enhancement and Updates

Frontiers in genetics, 2019-10, Vol.10, p.934-934

2019

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Data Warehousing with TargetMine for Omics Data Analysis

Methods in molecular biology (Clifton, N.J.), 2019-01, Vol.1986, p.35

2019

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Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging

Scientific reports, 2018-03, Vol.8 (1), p.5145-14, Article 5145

2018

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Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer

IEEE journal of biomedical and health informatics, 2022-09, Vol.26 (9), p.4785-4793

2022

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Integrated pathway clusters with coherent biological themes for target prioritisation

PloS one, 2014-06, Vol.9 (6), p.e99030-e99030

2014

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Integrative Analysis Reveals Common and Unique Roles of Tetraspanins in Fibrosis and Emphysema

Frontiers in genetics, 2020-12, Vol.11, p.585998-585998

2020

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Efficacy of urine reagent strips for analysis of cerebrospinal fluid cellularity and biochemical parameters

Asian Journal of Medical Sciences, 2022-09, Vol.13 (9), p.83-88

2022

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Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment

Briefings in bioinformatics, 2016-09, Vol.17 (5), p.841-862

2016

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An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework

Database : the journal of biological databases and curation, 2016, Vol.2016, p.baw009

2016

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Inhibitory Roles of Signal Transducer and Activator of Transcription 3 in Antitumor Immunity during Carcinogen-Induced Lung Tumorigenesis

Cancer research (Chicago, Ill.), 2012-06, Vol.72 (12), p.2990-2999

2012

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Validation of the IAC Yokohama system for reporting breast fine-needle aspiration cytology categorization of breast lesions in Vindhya region population

Asian Journal of Medical Sciences, 2023-05, Vol.14 (5), p.161-166

2023

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Understanding the Biological Context of NS5A–Host Interactions in HCV Infection: A Network-Based Approach

Journal of proteome research, 2013-06, Vol.12 (6), p.2537-2551

2013

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Network analysis and in silico prediction of protein–protein interactions with applications in drug discovery

TargetMine, an integrated data warehouse for candidate gene prioritisation and target discovery

Bijoliya Vindhyan Supergroup Sandstone Region of Rajasthan, India: Conservation of Geoheritage and Geotourism

Long Non-Coding RNAs, Nuclear Receptors and Their Cross-Talks in Cancer-Implications and Perspectives

Cross genome comparisons of serine proteases in Arabidopsis and rice

Network modeling and inference of peroxisome proliferator-activated receptor pathway in high fat diet-linked obesity

Flavivirus recruits the valosin-containing protein–NPL4 complex to induce stress granule disassembly for efficient viral genome replication

Genome-wide survey of prokaryotic serine proteases: analysis of distribution and domain architectures of five serine protease families in prokaryotes

Biology of Bone Morphogenetic Proteins in Skeleton Disease: Osteonecrosis in Sickle Cell Disease Patients

Applications of lignin nanoparticles for cancer drug delivery: An update

Host-pathogen protein-nucleic acid interactions: A comprehensive review

Integrating sequence and gene expression information predicts genome-wide DNA-binding proteins and suggests a cooperative mechanism

CLINE: a web-tool for the comparison of biological dendrogram structures

The TargetMine Data Warehouse: Enhancement and Updates

Data Warehousing with TargetMine for Omics Data Analysis

Double deletion of tetraspanins CD9 and CD81 in mice leads to a syndrome resembling accelerated aging

Integrative Network Modeling Highlights the Crucial Roles of Rho-GDI Signaling Pathway in the Progression of non-Small Cell Lung Cancer

Integrated pathway clusters with coherent biological themes for target prioritisation

Integrative Analysis Reveals Common and Unique Roles of Tetraspanins in Fibrosis and Emphysema

Efficacy of urine reagent strips for analysis of cerebrospinal fluid cellularity and biochemical parameters

Interpreting functional effects of coding variants: challenges in proteome-scale prediction, annotation and assessment

An integrative data analysis platform for gene set analysis and knowledge discovery in a data warehouse framework

Inhibitory Roles of Signal Transducer and Activator of Transcription 3 in Antitumor Immunity during Carcinogen-Induced Lung Tumorigenesis

Validation of the IAC Yokohama system for reporting breast fine-needle aspiration cytology categorization of breast lesions in Vindhya region population

Understanding the Biological Context of NS5A–Host Interactions in HCV Infection: A Network-Based Approach

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