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TrackMate: An open and extensible platform for single-particle tracking

Methods (San Diego, Calif.), 2017-02, Vol.115, p.80-90

2017

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TNF and IL-1 exhibit distinct ubiquitin requirements for inducing NEMO-IKK supramolecular structures

The Journal of cell biology, 2014-01, Vol.204 (2), p.231-245

2014

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Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb

eLife, 2018-03, Vol.7

2018

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Polar actomyosin contractility destabilizes the position of the cytokinetic furrow

Nature (London), 2011-08, Vol.476 (7361), p.462-466

2011

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Role of cortical tension in bleb growth

Proceedings of the National Academy of Sciences - PNAS, 2009-11, Vol.106 (44), p.18581-18586

2009

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Staying on track – Keeping things running in a high‐end scientific imaging core facility

Journal of microscopy (Oxford), 2024-06, Vol.294 (3), p.276-294

2024

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Bidirectional intraflagellar transport is restricted to two sets of microtubule doublets in the trypanosome flagellum

The Journal of cell biology, 2018-12, Vol.217 (12), p.4284-4297

2018

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Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and T cell receptor vesicular trafficking

Cellular microbiology, 2020-05, Vol.22 (5), p.e13166-n/a

2020

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Strategies of professional phagocytes in vivo: unlike macrophages, neutrophils engulf only surface-associated microbes

Journal of cell science, 2011-09, Vol.124 (Pt 18), p.3053-3059

2011

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TIM-1 Ubiquitination Mediates Dengue Virus Entry

Cell reports (Cambridge), 2018-05, Vol.23 (6), p.1779-1793

2018

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Altered spinogenesis in iPSC-derived cortical neurons from patients with autism carrying de novo SHANK3 mutations

Scientific reports, 2019-01, Vol.9 (1), p.94-94, Article 94

2019

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Extracting multiple surfaces from 3D microscopy images in complex biological tissues with the Zellige software tool

BMC biology, 2022-08, Vol.20 (1), p.1-183, Article 183

2022

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LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images

BMC biology, 2021-07, Vol.19 (1), p.136-136, Article 136

2021

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Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy

Nature communications, 2024-05, Vol.15 (1), p.4175-4175, Article 4175

2024

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The infectious hypoxia: occurrence and causes during Shigella infection

Microbes and infection, 2017-03, Vol.19 (3), p.157-165

2017

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Automated cell tracking using StarDist and TrackMate [version 1; peer review: 2 approved, 1 approved with reservations]

F1000 research, 2020, Vol.9, p.1279-1279

2020

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Bioimage analysis of Shigella infection reveals targeting of colonic crypts

Proceedings of the National Academy of Sciences - PNAS, 2015-06, Vol.112 (25), p.E3282-E3290

2015

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Object Segmentation and Ground Truth in 3D Embryonic Imaging

PloS one, 2016-06, Vol.11 (6), p.e0150853-e0150853

2016

Volltextzugriff (PDF)

A Quantitative Method for Measuring Phototoxicity of a Live Cell Imaging Microscope

Imaging and Spectroscopic Analysis of Living Cells : Imaging Live Cells in Health and Disease, 2012, Vol.506, p.291-309

2012

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A simple model for the fate of the cytokinesis midbody remnant: Implications for remnant degradation by autophagy: Modeling remnant production and degradation enables re‐interpretation of published data and improves design of future experiments

BioEssays, 2013-05, Vol.35 (5), p.472-481

2013

Volltextzugriff (PDF)

Anisotropic organization of circumferential actomyosin characterizes hematopoietic stem cells emergence in the zebrafish

eLife, 2018-08, Vol.7

2018

Volltextzugriff (PDF)

LPS-Induced Systemic Inflammation Affects the Dynamic Interactions of Astrocytes and Microglia with the Vasculature of the Mouse Brain Cortex

Cells (Basel, Switzerland), 2023-05, Vol.12 (10), p.1418

2023

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ExTrack characterizes transition kinetics and diffusion in noisy single-particle tracks

The Journal of cell biology, 2023-05, Vol.222 (5), p.1

2023

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Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists [version 1; peer review: 2 approved]

F1000 research, 2021, Vol.10, p.334-334

2021

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TrackMate: An open and extensible platform for single-particle tracking

TNF and IL-1 exhibit distinct ubiquitin requirements for inducing NEMO-IKK supramolecular structures

Multi-view light-sheet imaging and tracking with the MaMuT software reveals the cell lineage of a direct developing arthropod limb

Polar actomyosin contractility destabilizes the position of the cytokinetic furrow

Role of cortical tension in bleb growth

Objective comparison of particle tracking methods

Staying on track – Keeping things running in a high‐end scientific imaging core facility

Bidirectional intraflagellar transport is restricted to two sets of microtubule doublets in the trypanosome flagellum

Shigella impairs human T lymphocyte responsiveness by hijacking actin cytoskeleton dynamics and T cell receptor vesicular trafficking

Strategies of professional phagocytes in vivo: unlike macrophages, neutrophils engulf only surface-associated microbes

TIM-1 Ubiquitination Mediates Dengue Virus Entry

Altered spinogenesis in iPSC-derived cortical neurons from patients with autism carrying de novo SHANK3 mutations

Extracting multiple surfaces from 3D microscopy images in complex biological tissues with the Zellige software tool

LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images

Dynamic microfluidic single-cell screening identifies pheno-tuning compounds to potentiate tuberculosis therapy

The infectious hypoxia: occurrence and causes during Shigella infection

Automated cell tracking using StarDist and TrackMate [version 1; peer review: 2 approved, 1 approved with reservations]

Bioimage analysis of Shigella infection reveals targeting of colonic crypts

Object Segmentation and Ground Truth in 3D Embryonic Imaging

A Quantitative Method for Measuring Phototoxicity of a Live Cell Imaging Microscope

A simple model for the fate of the cytokinesis midbody remnant: Implications for remnant degradation by autophagy: Modeling remnant production and degradation enables re‐interpretation of published data and improves design of future experiments

Anisotropic organization of circumferential actomyosin characterizes hematopoietic stem cells emergence in the zebrafish

LPS-Induced Systemic Inflammation Affects the Dynamic Interactions of Astrocytes and Microglia with the Vasculature of the Mouse Brain Cortex

ExTrack characterizes transition kinetics and diffusion in noisy single-particle tracks

Highlights from the 2016-2020 NEUBIAS training schools for Bioimage Analysts: a success story and key asset for analysts and life scientists [version 1; peer review: 2 approved]

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