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Shewanella septentrionalis sp. nov. and Shewanella holmiensis sp. nov., isolated from Baltic Sea water and sediments

International journal of systematic and evolutionary microbiology, 2023-01, Vol.73 (4)

2023

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metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

Molecular ecology resources, 2015-11, Vol.15 (6), p.1403-1414

2015

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Global analysis of more than 50,000 SARS-CoV-2 genomes reveals epistasis between eight viral genes

Proceedings of the National Academy of Sciences - PNAS, 2020-12, Vol.117 (49), p.31519-31526

2020

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Bicarbonate and functional CFTR channel are required for proper mucin secretion and link cystic fibrosis with its mucus phenotype

The Journal of experimental medicine, 2012-07, Vol.209 (7), p.1263-1272

2012

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Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F

Genome announcements (Washington, DC), 2017, Vol.5 (14)

2017

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Use of potentially inappropriate medication and polypharmacy in older adults: a repeated cross-sectional study

BMC geriatrics, 2020-02, Vol.20 (1), p.73-73, Article 73

2020

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Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas

PLoS genetics, 2017-02, Vol.13 (2), p.e1006546

2017

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Diarrheal bacterial pathogens and multi-resistant enterobacteria in the Choqueyapu River in La Paz, Bolivia

PloS one, 2019-01, Vol.14 (1), p.e0210735-e0210735

2019

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Whole-Genome Sequencing Redefines Shewanella Taxonomy

Frontiers in microbiology, 2019, Vol.10, p.1861

2019

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A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

BMC biology, 2018-08, Vol.16 (1), p.84-84, Article 84

2018

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Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations

Nature communications, 2022-11, Vol.13 (1), p.6842-11, Article 6842

2022

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Repeated Isolation of Extended-Spectrum-β-Lactamase-Positive Escherichia coli Sequence Types 648 and 131 from Community Wastewater Indicates that Sewage Systems Are Important Sources of Emerging Clones of Antibiotic-Resistant Bacteria

Antimicrobial agents and chemotherapy, 2019-09, Vol.63 (9), p.e00823

2019

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Genomics of Helicobacter pylori

Helicobacter (Cambridge, Mass.), 2017-09, Vol.22 (S1), p.n/a

2017

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Metaxa2 Database Builder: enabling taxonomic identification from metagenomic or metabarcoding data using any genetic marker

Bioinformatics, 2018-12, Vol.34 (23), p.4027-4033

2018

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Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations

Nature communications, 2023-03, Vol.14 (1), p.1539-1539, Article 1539

2023

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Importance of potentially inappropriate medications, number of chronic conditions and medications for the risk of hospitalisation in elderly in Sweden: a case–control study

BMJ open, 2019, Vol.9 (9), p.e029477-e029477

2019

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In Vivo Analysis of the Viable Microbiota and Helicobacter pylori Transcriptome in Gastric Infection and Early Stages of Carcinogenesis

Infection and immunity, 2017, Vol.85 (10), p.e00031

2017

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Helicobacter pylori in ancient human remains

World journal of gastroenterology : WJG, 2019-11, Vol.25 (42), p.6289-6298

2019

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Pseudomonas boanensis sp. nov., a bacterium isolated from river water used for household purposes in Boane District, Mozambique

International journal of systematic and evolutionary microbiology, 2022-01, Vol.72 (7)

2022

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Whole Genome Sequence and Phylogenetic Analysis Show Helicobacter pylori Strains from Latin America Have Followed a Unique Evolution Pathway

Frontiers in cellular and infection microbiology, 2017-02, Vol.7, p.50-50

2017

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Acinetobacter portensis sp. nov. and Acinetobacter guerrae sp. nov., isolated from raw meat

International journal of systematic and evolutionary microbiology, 2020-01, Vol.70 (8), p.4544-4554

2020

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Whole Genome sequence and Phylogenetic Analysis Show Helicobacter pylori Strains from Latin America Have Followed a Unique

Frontiers in cellular and infection microbiology, 2017-02, Vol.7

2017

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Isolates from Colonic Spirochetosis in Humans Show High Genomic Divergence and Potential Pathogenic Features but Are Not Detected Using Standard Primers for the Human Microbiota

Journal of bacteriology, 2019, Vol.201 (21), p.e00272

2019

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Escherichia coli ST2797 Is Abundant in Wastewater and Might Be a Novel Emerging Extended-Spectrum Beta-Lactamase E. coli

Microbiology spectrum, 2023-08, Vol.11 (4), p.e0448622-e0448622

2023

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Shewanella septentrionalis sp. nov. and Shewanella holmiensis sp. nov., isolated from Baltic Sea water and sediments

metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data

Global analysis of more than 50,000 SARS-CoV-2 genomes reveals epistasis between eight viral genes

Bicarbonate and functional CFTR channel are required for proper mucin secretion and link cystic fibrosis with its mucus phenotype

Draft Genome Sequences of Six Strains of Streptococcus pneumoniae from Serotypes 5, 6A, 6B, 18C, 19A, and 23F

Use of potentially inappropriate medication and polypharmacy in older adults: a repeated cross-sectional study

Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas

Diarrheal bacterial pathogens and multi-resistant enterobacteria in the Choqueyapu River in La Paz, Bolivia

A 500-year tale of co-evolution, adaptation, and virulence: Helicobacter pylori in the Americas

Whole-Genome Sequencing Redefines Shewanella Taxonomy

A GWAS on Helicobacter pylori strains points to genetic variants associated with gastric cancer risk

Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations

Repeated Isolation of Extended-Spectrum-β-Lactamase-Positive Escherichia coli Sequence Types 648 and 131 from Community Wastewater Indicates that Sewage Systems Are Important Sources of Emerging Clones of Antibiotic-Resistant Bacteria

Genomics of Helicobacter pylori

Metaxa2 Database Builder: enabling taxonomic identification from metagenomic or metabarcoding data using any genetic marker

Author Correction: Repeated out-of-Africa expansions of Helicobacter pylori driven by replacement of deleterious mutations

Importance of potentially inappropriate medications, number of chronic conditions and medications for the risk of hospitalisation in elderly in Sweden: a case–control study

In Vivo Analysis of the Viable Microbiota and Helicobacter pylori Transcriptome in Gastric Infection and Early Stages of Carcinogenesis

Helicobacter pylori in ancient human remains

Pseudomonas boanensis sp. nov., a bacterium isolated from river water used for household purposes in Boane District, Mozambique

Whole Genome Sequence and Phylogenetic Analysis Show Helicobacter pylori Strains from Latin America Have Followed a Unique Evolution Pathway

Acinetobacter portensis sp. nov. and Acinetobacter guerrae sp. nov., isolated from raw meat

Whole Genome sequence and Phylogenetic Analysis Show Helicobacter pylori Strains from Latin America Have Followed a Unique

Isolates from Colonic Spirochetosis in Humans Show High Genomic Divergence and Potential Pathogenic Features but Are Not Detected Using Standard Primers for the Human Microbiota

Escherichia coli ST2797 Is Abundant in Wastewater and Might Be a Novel Emerging Extended-Spectrum Beta-Lactamase E. coli

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